Detailed information of evm.model.Ap5.94 in Astrangia poculata

Genomic Location: Ap5:1103061...1160489
NR annotation: CAH3126127.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O94915Protein furry homolog-like OS=Homo sapiens OX=9606 GN=FRYL PE=1 SV=2
Q5TBA9Protein furry homolog OS=Homo sapiens OX=9606 GN=FRY PE=1 SV=1
E9Q8I9Protein furry homolog OS=Mus musculus OX=10090 GN=Fry PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002676 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →
Lectin_CLectin C-type domainDomainInterproscan
PF01823
all species →
MACPFMAC/Perforin domainDomainInterproscan
PF14225
all species →
MOR2-PAG1_CCell morphogenesis C-terminalFamilyInterproscan
PF14228
all species →
MOR2-PAG1_midCell morphogenesis central regionFamilyInterproscan
PF00008
all species →
EGFEGF-like domainDomainInterproscan
PF19421
all species →
Fry_CFurry protein C-terminalDomainInterproscan
PF14222
all species →
MOR2-PAG1_NCell morphogenesis N-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304
all species →
DomainC-type lectin-likeInterproscan
IPR020864
all species →
DomainMembrane attack complex component/perforin (MACPF) domainInterproscan
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR006212
all species →
RepeatFurin-like repeatInterproscan
IPR025481
all species →
DomainCell morphogenesis protein C-terminalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR016186
all species →
Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR039867
all species →
FamilyProtein furry/Tao3/Mor2Interproscan
IPR029473
all species →
DomainCell morphogenesis central regionInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan
IPR045842
all species →
DomainProtein furry, C-terminalInterproscan
IPR025614
all species →
DomainCell morphogenesis protein N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12295
all species →
FURRY-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000902
all species →
Biological Processcell morphogenesisInterproscan
GO:0005938
all species →
Cellular Componentcell cortexInterproscan
GO:0030427
all species →
Cellular Componentsite of polarized growthInterproscan
GO:0031175
all species →
Biological Processneuron projection developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap5.94.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap5.94 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism · cold control 14 0 0.00 0.00
whole organism · heat control 12 0 0.00 0.00
whole organism · cold challenge 12 0 0.00 0.00
whole organism · heat challenge 11 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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