Detailed information of evm.model.Ap6.1028 in Astrangia poculata

Genomic Location: Ap6:9834370...9835411
NR annotation: RMX54204.1, hypothetical protein pdam_00013649 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P02707Hepatic lectin OS=Gallus gallus OX=9031 PE=1 SV=1
Q67EQ1C-type lectin domain family 4 member E OS=Rattus norvegicus OX=10116 GN=Clec4e PE=1 SV=1
B0VXV1Snaclec 2 OS=Sistrurus catenatus edwardsii OX=8762 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000204 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR050801
all species →		FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR018378
all species →		Conserved_siteC-type lectin, conserved siteInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801
all species →		LITHOSTATHINEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap6.1028. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.1028.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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