Detailed information of evm.model.Ap6.11 in Astrangia poculata

Genomic Location: Ap6:60901...66886
NR annotation: KAJ7393624.1, hypothetical protein OS493_006611 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y5M8Signal recognition particle receptor subunit beta OS=Homo sapiens OX=9606 GN=SRPRB PE=1 SV=3
Q4FZX7Signal recognition particle receptor subunit beta OS=Rattus norvegicus OX=10116 GN=Srprb PE=2 SV=1
P47758Signal recognition particle receptor subunit beta OS=Mus musculus OX=10090 GN=Srprb PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006781 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09439
all species →		SRPRBSignal recognition particle receptor beta subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019009
all species →		FamilySignal recognition particle receptor, beta subunitInterproscan
IPR024156
all species →		FamilySmall GTPase superfamily, ARF typeInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005225
all species →		DomainSmall GTP-binding protein domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11711
all species →		ADP RIBOSYLATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →		Molecular FunctionGTP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12272SRPRB, SRP102; signal recognition particle receptor subunit beta-GTP-binding proteinsko04031deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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