Detailed information of evm.model.Ap6.1255 in Astrangia poculata

Genomic Location: Ap6:12302266...12306158
NR annotation: KAJ7379569.1, hypothetical protein OS493_013961 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O43246Cationic amino acid transporter 4 OS=Homo sapiens OX=9606 GN=SLC7A4 PE=1 SV=3
Q8BLQ7Cationic amino acid transporter 4 OS=Mus musculus OX=10090 GN=Slc7a4 PE=1 SV=1
B3TP03Cationic amino acid transporter 2 OS=Gallus gallus OX=9031 GN=SLC7A2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000351 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13520
all species →		AA_permease_2Amino acid permeaseFamilyInterproscan
PF13906
all species →		AA_permease_CC-terminus of AA_permeaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002293
all species →		FamilyAmino acid/polyamine transporter IInterproscan
IPR029485
all species →		DomainCationic amino acid transporter, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43243
all species →		INNER MEMBRANE TRANSPORTER YGJI-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006865
all species →		Biological Processamino acid transportInterproscan
GO:0015171
all species →		Molecular Functionamino acid transmembrane transporter activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.1255.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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