Detailed information of evm.model.Ap6.1297_evm.model.Ap6.1298 in Astrangia poculata

Genomic Location: Ap6:12776380...12787632
NR annotation: XP_020621892.1, cationic amino acid transporter 3-like isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P30825High affinity cationic amino acid transporter 1 OS=Homo sapiens OX=9606 GN=SLC7A1 PE=1 SV=1
Q09143High affinity cationic amino acid transporter 1 OS=Mus musculus OX=10090 GN=Slc7a1 PE=1 SV=1
O08812Cationic amino acid transporter 3 OS=Rattus norvegicus OX=10116 GN=Slc7a3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000351 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13520
all species →		AA_permease_2Amino acid permeaseFamilyInterproscan
PF13906
all species →		AA_permease_CC-terminus of AA_permeaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002293
all species →		FamilyAmino acid/polyamine transporter IInterproscan
IPR029485
all species →		DomainCationic amino acid transporter, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43243
all species →		INNER MEMBRANE TRANSPORTER YGJI-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0006865
all species →		Biological Processamino acid transportInterproscan
GO:0015171
all species →		Molecular Functionamino acid transmembrane transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.1297_evm.model.Ap6.1298.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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