Detailed information of evm.model.Ap6.1381 in Astrangia poculata

Genomic Location: Ap6:13477694...13481574
NR annotation: KAJ7379671.1, Tetratricopeptide repeat protein 36 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RL75Tetratricopeptide repeat protein 36 homolog OS=Nematostella vectensis OX=45351 GN=ttc36 PE=3 SV=1
A8E7I5Tetratricopeptide repeat protein 36 OS=Danio rerio OX=7955 GN=ttc36 PE=2 SV=1
Q8VBW8Tetratricopeptide repeat protein 36 OS=Mus musculus OX=10090 GN=Ttc36 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007131 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13414
all species →		TPR_11TPR repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR038906
all species →		FamilyTetratricopeptide repeat protein 36Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21405
all species →		CDNA SEQUENCE BC021608Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0060271
all species →		Biological Processcilium assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24941TTC36, HBP21; tetratricopeptide repeat protein 36-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP