Genomic Location: Ap6:1296330...1306489
NR annotation: XP_027053321.1, dnaJ homolog subfamily C member 16-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap6.147 |
| Transcript |
| evm.model.Ap6.147 |
| Protein |
| evm.model.Ap6.147 |
| UniProt accession | Description |
|---|---|
| Q5ZKZ4 | DnaJ homolog subfamily C member 16 OS=Gallus gallus OX=9031 GN=DNAJC16 PE=2 SV=1 |
| Q5RCM7 | DnaJ homolog subfamily C member 16 OS=Pongo abelii OX=9601 GN=DNAJC16 PE=2 SV=1 |
| Q9Y2G8 | DnaJ homolog subfamily C member 16 OS=Homo sapiens OX=9606 GN=DNAJC16 PE=1 SV=3 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006147 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00085 all species → | Thioredoxin | Thioredoxin | Domain | Interproscan |
| PF00226 all species → | DnaJ | DnaJ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036869 all species → | Homologous_superfamily | Chaperone J-domain superfamily | Interproscan |
| IPR001623 all species → | Domain | DnaJ domain | Interproscan |
| IPR018253 all species → | Conserved_site | DnaJ domain, conserved site | Interproscan |
| IPR013766 all species → | Domain | Thioredoxin domain | Interproscan |
| IPR052448 all species → | Family | DnaJ Homolog Subfamily C Member 16 | Interproscan |
| IPR036249 all species → | Homologous_superfamily | Thioredoxin-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44303 all species → | DNAJ HOMOLOG SUBFAMILY C MEMBER 16 | Interproscan |
evm.model.Ap6.147. This gene does have a gene model — the search simply returned no hit.| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K09536 | DNAJC16; DnaJ homolog subfamily C member 16 | - | Chaperones and folding catalysts | ko03110 | deepkoala |
Transcript abundance of evm.model.Ap6.147 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
