Gene detail

Detailed information of evm.model.Ap6.1680 in Astrangia poculata

Genomic Location: Ap6:16764220...16766453
NR annotation: KAJ7394689.1, hypothetical protein OS493_000514 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q21565	Putative ammonium transporter 3 OS=Caenorhabditis elegans OX=6239 GN=amt-3 PE=3 SV=2
Q20605	Putative ammonium transporter 2 OS=Caenorhabditis elegans OX=6239 GN=amt-2 PE=3 SV=3
Q9BLG3	Ammonium transporter 2 OS=Dictyostelium discoideum OX=44689 GN=amtB PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000614 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00909 all species →	Ammonium_transp	Ammonium Transporter Family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024041 all species →	Domain	Ammonium transporter AmtB-like domain	Interproscan
IPR002229 all species →	Family	Blood group Rhesus C/E/D polypeptide	Interproscan
IPR029020 all species →	Homologous_superfamily	Ammonium/urea transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11730 all species →	AMMONIUM TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008519 all species →	Molecular Function	ammonium channel activity	Interproscan
GO:0072488 all species →	Biological Process	ammonium transmembrane transport	Interproscan
GO:0097272 all species →	Biological Process	ammonium homeostasis	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03320	amt, AMT, MEP; ammonium transporter, Amt family	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.