Detailed information of evm.model.Ap6.1848 in Astrangia poculata

Genomic Location: Ap6:18506972...18511951
NR annotation: XP_027050858.1, spermidine synthase-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P19623Spermidine synthase OS=Homo sapiens OX=9606 GN=SRM PE=1 SV=1
Q64674Spermidine synthase OS=Mus musculus OX=10090 GN=Srm PE=1 SV=1
Q9XY92Spermidine synthase OS=Dictyostelium discoideum OX=44689 GN=spsA PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002572 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17284
all species →
Spermine_synt_NSpermidine synthase tetramerisation domainDomainInterproscan
PF01564
all species →
Spermine_synthSpermine/spermidine synthase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →
Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR001045
all species →
FamilySpermidine/spermine synthasesInterproscan
IPR035246
all species →
DomainSpermidine synthase, tetramerisation domainInterproscan
IPR037163
all species →
Homologous_superfamilySpermidine synthase, tetramerisation domain superfamilyInterproscan
IPR030374
all species →
DomainPolyamine biosynthesis domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11558
all species →
SPERMIDINE/SPERMINE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.1848.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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