Detailed information of evm.model.Ap6.1980 in Astrangia poculata

Genomic Location: Ap6:19608871...19613223
NR annotation: KAJ7378449.1, hypothetical protein OS493_022983 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13181
all species →		TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13424
all species →		TPR_12Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019734
all species →		RepeatTetratricopeptide repeatInterproscan
IPR011990
all species →		Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR051476
all species →		FamilyBacterial Response Regulator Aspartate PhosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46630
all species →		TETRATRICOPEPTIDE REPEAT PROTEIN 29Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0003341
all species →		Biological Processcilium movementInterproscan
GO:0005929
all species →		Cellular ComponentciliumInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15837GPSM2; G-protein signaling modulator 2-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP