Detailed information of evm.model.Ap6.2033 in Astrangia poculata

Genomic Location: Ap6:20175519...20176371
NR annotation: KAJ7387939.1, 60S acidic ribosomal protein P2 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P42039Large ribosomal subunit protein P2 OS=Davidiella tassiana OX=29918 GN=CLAH5 PE=1 SV=3
P08094Large ribosomal subunit protein P2A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpp201 PE=1 SV=1
P02401Large ribosomal subunit protein P2 OS=Rattus norvegicus OX=10116 GN=Rplp2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008715 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00428
all species →		Ribosomal_60s60s Acidic ribosomal proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044076
all species →		FamilyLarge ribosomal subunit protein P2, eukaryotesInterproscan
IPR027534
all species →		FamilyLarge ribosomal subunit protein P1/P2Interproscan
IPR038716
all species →		Homologous_superfamilyLarge ribosomal subunit protein P1/P2, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21141
all species →		60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002182
all species →		Biological Processcytoplasmic translational elongationInterproscan
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006414
all species →		Biological Processtranslational elongationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2033.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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