Detailed information of evm.model.Ap6.21 in Astrangia poculata

Genomic Location: Ap6:160131...164494
NR annotation: KAJ7393610.1, Claudin domain-containing protein 2 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005754 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00822
all species →		PMP22_ClaudinPMP-22/EMP/MP20/Claudin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050579
all species →		FamilyPeripheral Myelin Protein 22/Epithelial Membrane ProteinInterproscan
IPR004031
all species →		FamilyPMP-22/EMP/MP20/ClaudinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10671
all species →		EPITHELIAL MEMBRANE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K26255EMP1; epithelial membrane protein 1-Focal adhesionko04510deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP