Detailed information of evm.model.Ap6.2203 in Astrangia poculata

Genomic Location: Ap6:21725177...21729402
NR annotation: CAH3180605.1, unnamed protein product [Porites evermanni]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002517 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap6.2203. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR039844
all species →		FamilyNucleolar pre-ribosomal-associated protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13500
all species →		NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000463
all species →		Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0000466
all species →		Biological Processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18192ATP10; mitochondrial ATPase complex subunit ATP10-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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