Detailed information of evm.model.Ap6.2213 in Astrangia poculata

Genomic Location: Ap6:21766851...21787731
NR annotation: XP_020618156.1, brefeldin A-inhibited guanine nucleotide-exchange protein 3-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5TH69Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Homo sapiens OX=9606 GN=ARFGEF3 PE=1 SV=3
Q3UGY8Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Mus musculus OX=10090 GN=Arfgef3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004365 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20252
all species →
BIG2_CBIG2 C-terminal domainDomainInterproscan
PF16213
all species →
DCBMon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domainDomainInterproscan
PF09324
all species →
Sec7-like_HDSMon2/Sec7/BIG1-like, HDSDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR046455
all species →
DomainSec7/BIG1-like, C-terminal domainInterproscan
IPR032629
all species →
DomainMon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domainInterproscan
IPR015403
all species →
DomainMon2/Sec7/BIG1-like, HDSInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10663
all species →
GUANYL-NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap6.2213. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2213.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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