Detailed information of evm.model.Ap6.224 in Astrangia poculata

Genomic Location: Ap6:2050143...2055595
NR annotation: KAJ7393415.1, DNA ligase 3 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P97386DNA ligase 3 OS=Mus musculus OX=10090 GN=Lig3 PE=1 SV=2
P49916DNA ligase 3 OS=Homo sapiens OX=9606 GN=LIG3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003047 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16759
all species →		LIG3_BRCTDNA ligase 3 BRCT domainFamilyInterproscan
PF10283
all species →		zf-CCHHPBZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →		Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357
all species →		DomainBRCT domainInterproscan
IPR031916
all species →		DomainDNA ligase 3, BRCT domainInterproscan
IPR019406
all species →		DomainAprataxin and PNK-like factor, PBZ domainInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap6.224. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap6.224. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.224.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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