Detailed information of evm.model.Ap6.2286 in Astrangia poculata

Genomic Location: Ap6:22375473...22380797
NR annotation: XP_020621955.1, RWD domain-containing protein 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H446RWD domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RWDD1 PE=1 SV=1
Q99ND9RWD domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rwdd1 PE=2 SV=1
Q9CQK7RWD domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rwdd1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007792 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16543
all species →		DFRP_CDRG Family Regulatory Proteins, Tma46DomainInterproscan
PF05773
all species →		RWDRWD domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006575
all species →		DomainRWD domainInterproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR032378
all species →		DomainZC3H15/TMA46 family, C-terminalInterproscan
IPR040213
all species →		FamilyGIR2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12292
all species →		RWD DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0002181
all species →		Biological Processcytoplasmic translationInterproscan
GO:0005844
all species →		Cellular Componentobsolete polysomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2286.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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