Gene detail

Detailed information of evm.model.Ap6.2301 in Astrangia poculata

Genomic Location: Ap6:22546118...22579697
NR annotation: XP_020622028.1, leucine-rich repeat serine/threonine-protein kinase 1-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap6.2301

atggctgcaccagtatttgtttttcaaggggagctgttacatcaggcagccatctatgatcagaaggatcttctgaagtctctgctaaaagcaggtgtccatggagaggccaacagtcctgatcctcgtggattaacaccgctacacactgccgcacttcatgatagtgtggagtgtctaaaggagttgttggaatcgaaaggagatgcaaacatacaatcttctccagaagataactgctcaactgctcttcatcacgctgctcgtaatggtcatcgccgctgtctcaaagtccttattgatgcaggggcaagaactgatactaagaacaaggaaggcaagacagcaatgcagatagcatttgaaaaggggaattatgagtgtggagactacttaagaactgtggaaggtatcagaaaagcagcacgagaagaggaagtatcccaagaactctttcgttcttgtaccattggcgatttaccaagagtgacagagttgctagaggaagctagtactgttacaatcaacaagttgtaccaaggaggttgtaccctgctttacaaggcctgtcaaggtggccatcttgaaattgtaaaactcctactgagccgaggtgcagatggctctccaaacactatcacaggaattgctccactttatgctgcttgtcttagtgggaatgtcgagttggtgagactcatggtacaggctatgccgcacacaatcaatattccttctaaaatggacaattccacggctcttcacgtggcagcgggtgaaggaaatgaagagattgttaaaagcatcctacaagttcctagggatggtgaagagttgactccttgtaacaagattgacatgagcgtccgtacatcaaatggcatgacagctcttcattgtgctgcacagggaggttttgtaaaggttgccgagcaactgttagattgtcgtcacaagtgtgctgggccatgccaggcaaacctaacaatatcagtgaatgcgagaagtgacatgggacatacagctctgcacaacgccgtcatggttggatacagagatgttgttagcttactcataaaacatggcgcagacgtcaacctctgtgctggtcatcagggagagaatgacacagctgcatcacgtgtcaatcttggttctgacatgttaacccccctggagatcgcctgtcagcaaggagacttggaaatgctgaagttgttactgaacagcggggctgaggatgctgatcacaagtgcttgaattctgccattttagctgataatattgaagtgataatgatcctacttcaaagaggtgcccaagttgaccaagagcataagctgcacccatcaagaacaagcagcagccctgaagagatctggagactgtcggcagtacccatctctatactttggaacaacatgaaactgtcaaagttggagcatcaatggatatttacagccgcaagtacaataaatccgtatgacggaattgttgctggactgcacccctcacttaaaacaataacacgtgtggatgtatcaagcaacaaactttcaaagcttccaattgtgttatttcaaatgcctgcgttgaagacgctaactgcgtcggaaaatgccattactggtctgcccagcctctggcttggaggaaagaaagagatgacgcagaaaaataatttaaagcctggaaagaaaccgtacagttcctgcgagaacattcaggaaaatcttgcttttgaggaaagtgagcaggatttcacttatgctgaatccggttggaactgccctcacttagaagacattgaattgcatcacaattcccttacatccttgcccacttgcctgtttgaattaccgatgctgaaatatttgaacgtttccaaaaacgatatacagtctcttccctttgagatgtggactgctcctgtgttgaaatcgttggatctgaagggaaattttgtgaggaagttgccagttatgaaaacaagacgaggtggacgagggggaaatggaaaaacttcaagtctgcctcgtgcaaaagtcctgtctttgagcaaagataacttgcctgtagacatgagccaagtgaatggaaccttagaaacaaaaacaatgaagacgaaaagtgctgaagtaaatggcaaaaaaagtcaccccctgaaaatgtttcaccacagtcaactgtggggaacaagacatggcgacgaaattgaagactcggattccgaggaggaagacattgatcccacaaaaggatcttctctacagaagcttgatttgtcatctaaccaaatagtgaagatccctttaggcttgtcttgcttggctactaatcttggaacgctgaatttatcaaacaacaatatttctgacgtcccttcgctagctctgtttccaacatcacttgggacgttggatttgtcccacaataacttgactgcattccatcctattgctgaaaatatcccatatggaaatgggacagaaaatcgatgttacaatgtcattgaaggtcaaagaccgagtatgagaagaagaattagcgcagagaatggactgcaagtcggcagagcaagactttgccgacattcaaagcacagaatgttgccgcatctgaagcggctcgacttgaacaacaacaagcttgaggaaattcactttatgcttcctcgaaatcggcctgcttcggttgcctctgtcactgacacatcaccagcaaactcaaggagtccagggattttgtttcccagcttacagtctctaactctcagtaacaatgagctgtggagtttaccaagggatgtaggggttctctccaagcttggatccctgcatgtcagtcacacgaaaatcacgcgtttgccacctgaggttgggcttctgtcggaactgtgggacttgcagtaccaggggctacagctgcaggatatagagcccagtgtgctggaaaggaaaaagaccaaagatattgtaggatacctgagatcagttttggaaaggtctgagccttacccaagcatgaaactcatgtttgttggagttgcaaacattggtaagacaacactgttgaaccagctcagacaagagggaacaggcagctatcagaactcgcctcctgtcggctggacggagaggaaggtcaagaaaaaaagagctggatcaaccattggtcgcagtaagaaagctgaagtgaatatctctactgttggtgttgatgtgtgtgactggatctatccaaagaaaactgattttgccttcggacgagcagacaacagaccaagcatcaaatttagcacctgggactttgggggacagcgcgagtattatgccacacatcagtgcttcctgtctcatcgctcactttacatagctatgtggaaagtcacagatggtgaacaaggcgtgaatgaaattgagccctggctgctgaatattcaggctcgtgccccagattctccagtcatcattgttggaacacactatgacatgctggaagcggacaagcgatcagagtacctcacaaacctcaggaccatgatatcagacaactacattgccactgagtttggtggaagagtccagaatacacgggaacgaggcttacccaaggtgatggccatgatcgaggtcagctgtaagactgggtaccacatccgggaattaaggcaactgatttacaccacttcatttgagatcaaagagaaaggaagtcgtgtgtctctgttaaagactccgattccagcaagttacattgcagttgaagacgctgttggcgtgattcgtgagagatgttatcgtgacgatcagactcctgtccttaagtctgaacaattcagtgctgccgtcgaagctgagcttgcgagacaaaaggttcatttgaggggaccggaggaactacagcaggcgacaagattcctacatgacaatggtgtgttgttgcattatgacgacccattgttgcgtgacttgtacttcttggaccctcagtggttgtgtgacatgttggcgcacgttgtcacggtcagggaagtcaaccctcacatcaacaatggtgtgatgaagcgctccgacctatcccagatcttccggagtgaacgttttccagcgaacctaatgagccagtacattaacctgttaagcaagtttgaagtggcgctgccatggagtgcggagtttctacttgtcccctccctactccctgacagtcagcaagagaccaaccagcccgtggcagctggggtcagttctgcagtggctcaagccatgaattcgactgcttataccaaaggcaaggttctgcggagacagtacgtcatgtcctatgtgcccagcgggttctggccgagactggtcaccagggtgatcccagatgaacgaatccgcgatgcagttaagtcatgttgtcagctgtctcctgatgggccagtacaggagggtgacagagacaaactggcttctgtggcgcagccagagtggtcatgctggaagactggggttgaattgtcgtgttttggtgtgaagttgctcaggatttgtgagctggaaggaagaccattttatggtgcaccagatgacatcgctaatccattacactacagacgtgaagtacacgacactacacggtattccacaattgaggttgtcacgccgtgtgtccgtatcagaatggaaaagtttgagcagcgcaagagactgacttcaaataggaaaacccggggaaggccagacgaagaccgccgcgaaggatcaaagttgattggtttcaaagtgaagtctgtttcagacagttgcatccagtccgccgctcggctgatcgccattactgctgaacatatggacacactcatcaccgattggttcccaggccttgatgccatcacggtgcaagggtatcgcctggttaccaggattatcccgtgccccaagtgcatcatggcggtgtgtggggttaatcatgaggagaatgagaaggaaagtgaaagcgtagcgatgaatgtccctctgatatcatcttccggtccagatagcggcataaatctgtctacgactgacggaagcagtactagtgcttcgccttggccgagtcctgttcatgtgtcgagaagacctggtgctaatggagaagggagcccgccatcacagaacagtggcgcgtctgatatgcaacaagacctgagccatggctctccccaggctccgccacgcgatcgtttgttatcggagcctcagagattcacgtttggatccgtaagcaccgagcgggagactgaggacgagagttccagttgttttgactacacgtctgatcagagctccgacggtcgcggcagtgaaagcagtcaatcattctccccagagagggctggcaggagagggaaatcgtcaagaaagggccgcagggcgagaggcagtagtgacagcgaggaaagtgacgtggcggacatgaatactaagaccaagaagtctggtcaggataagaaaagtcaagaggagccaaagaaaggaagtactgacagcactgagagttttaaacgtggatcgtgtaagtacggctcgttcagaaagcggcccactaaagatgacatggtgatttactcatttgagtttgaagaatgtgttcttgctgcgtatcacactgagcccgtggaatgcaccatgcatggtccgctggagctcagagaactcgccccggatgctatgttcgaagacatcgctcccaatatgaacattcaagcgtccgacatcacacgagggaaatttctgggcaaaggaacgttcggttcagtattccgcggggaactgaaacaaacatccggggactcactaactatcgccatgaagatgccgctgaacaatgaagtaggagaggaggcgcggccggaagaagtgcaaatggctgcagcagccatgagagcgttgaaagaaaatccaactatggcacttaatgatgcgtataggaccgtgcgtcaggagatggccatccttcttcccttgagacatcagaatatcgtgtcgttgctaggttactgtctaaacccgttctgtatggtcttggagttcgcaccgcaaggggccttggaccgaattctcgccaactacaagagagctggagttcgccttaacgcctacgtcatgcaaaaatgtattgtacagtgtgcttcggcgttgaagtatttacaccgtcaccatatcatctatcgagacctcaagtcagaaaacattttagtgtggcagttcccagctccctccggcccaggtcaatctagtcaccaagttaccatcaaactggctgactacggtatcagccggtcagcggcgctagcgggaatgaagggcctgggcggtactcctggttttatggcccccgagattgaaaagtatgtcgggaaggagttgtatacggacaaagtggactcgttttcgtttggaatgtacatttatgagctagtgacgctacatcagccgtttaatgatctcaaccctgctcaggtgaaacagcttattgtggagggtcacaggccgccattaacagctaaggataagaaagctccagtgttcgtccttgatctcatggcatggtgctggcagcaggaagcggacaggaggccgccatcacatcacatctcactactggcttctgcaactgaatttcctcgcctctctgacgtcatcaccttcgacaagcagctgggtttgaactgcgcggttactgctgggtcacgtgtcagtcaaagccgcggggcggacgatagagcaagtgtgggctcagaagtatggctctgtcggagcgagctgaacgctgggataggtacaggaaaaatcagtgttcttggttacagccgtggtcgatgttatcacaaaaaggaatttttcgtgggcaagtcctgcatccgggttgcttgcagtgtgggaagcacggtgtggcttgggaccgagtcaggaacgctccacgtgttttgtgcaatgacgtacaagcagctctgcaaaggatcgatccgctctaacagatacatcttaaacatgatccacgttccgcgagcgaactgggttctagtggcattggcggatggccaggttctggcgtacaatgataacatctctaatcactaccattactccgagtcggcggggcagacccctgttcatgagctcctacccaaccgggtatacaccggcaacggaatccccattcattgcatggcagctctgccgttgaagaaaccccagggaaatgaagtccgaccggaggctgcgggggattcatccgaggactccgatgaccggaacagtccgtgcggtgacgagtacatctgcgaagtttggtgtgggcaggaaaaaggaagaataacaattcttgacggtgaagagcttcagaagatttgcaccaagtcagctgaagacagtgaacccgactcctcgtcgcaaagggaacacagcgtgtcccatcttgagacctgccagacgaccggaactaccatcagcggagatgaccccgtcggtaggtccgtatgggtggctttgttccccggtacccgcgtgttccggtgggatgccctggagaagaagattgtacgcagtgtggattgctcacaacatccaccaagatttgaaggtccaaaagccaaagcaccggtcaggagaggcgcggacccgaatcctttgagcggtgagtga

Transcript

evm.model.Ap6.2301

ATGGCTGCACCAGTATTTGTTTTTCAAGGGGAGCTGTTACATCAGGCAGCCATCTATGATCAGAAGGATCTTCTGAAGTCTCTGCTAAAAGCAGGTGTCCATGGAGAGGCCAACAGTCCTGATCCTCGTGGATTAACACCGCTACACACTGCCGCACTTCATGATAGTGTGGAGTGTCTAAAGGAGTTGTTGGAATCGAAAGGAGATGCAAACATACAATCTTCTCCAGAAGATAACTGCTCAACTGCTCTTCATCACGCTGCTCGTAATGGTCATCGCCGCTGTCTCAAAGTCCTTATTGATGCAGGGGCAAGAACTGATACTAAGAACAAGGAAGGCAAGACAGCAATGCAGATAGCATTTGAAAAGGGGAATTATGAGTGTGGAGACTACTTAAGAACTGTGGAAGGTATCAGAAAAGCAGCACGAGAAGAGGAAGTATCCCAAGAACTCTTTCGTTCTTGTACCATTGGCGATTTACCAAGAGTGACAGAGTTGCTAGAGGAAGCTAGTACTGTTACAATCAACAAGTTGTACCAAGGAGGTTGTACCCTGCTTTACAAGGCCTGTCAAGGTGGCCATCTTGAAATTGTAAAACTCCTACTGAGCCGAGGTGCAGATGGCTCTCCAAACACTATCACAGGAATTGCTCCACTTTATGCTGCTTGTCTTAGTGGGAATGTCGAGTTGGTGAGACTCATGGTACAGGCTATGCCGCACACAATCAATATTCCTTCTAAAATGGACAATTCCACGGCTCTTCACGTGGCAGCGGGTGAAGGAAATGAAGAGATTGTTAAAAGCATCCTACAAGTTCCTAGGGATGGTGAAGAGTTGACTCCTTGTAACAAGATTGACATGAGCGTCCGTACATCAAATGGCATGACAGCTCTTCATTGTGCTGCACAGGGAGGTTTTGTAAAGGTTGCCGAGCAACTGTTAGATTGTCGTCACAAGTGTGCTGGGCCATGCCAGGCAAACCTAACAATATCAGTGAATGCGAGAAGTGACATGGGACATACAGCTCTGCACAACGCCGTCATGGTTGGATACAGAGATGTTGTTAGCTTACTCATAAAACATGGCGCAGACGTCAACCTCTGTGCTGGTCATCAGGGAGAGAATGACACAGCTGCATCACGTGTCAATCTTGGTTCTGACATGTTAACCCCCCTGGAGATCGCCTGTCAGCAAGGAGACTTGGAAATGCTGAAGTTGTTACTGAACAGCGGGGCTGAGGATGCTGATCACAAGTGCTTGAATTCTGCCATTTTAGCTGATAATATTGAAGTGATAATGATCCTACTTCAAAGAGGTGCCCAAGTTGACCAAGAGCATAAGCTGCACCCATCAAGAACAAGCAGCAGCCCTGAAGAGATCTGGAGACTGTCGGCAGTACCCATCTCTATACTTTGGAACAACATGAAACTGTCAAAGTTGGAGCATCAATGGATATTTACAGCCGCAAGTACAATAAATCCGTATGACGGAATTGTTGCTGGACTGCACCCCTCACTTAAAACAATAACACGTGTGGATGTATCAAGCAACAAACTTTCAAAGCTTCCAATTGTGTTATTTCAAATGCCTGCGTTGAAGACGCTAACTGCGTCGGAAAATGCCATTACTGGTCTGCCCAGCCTCTGGCTTGGAGGAAAGAAAGAGATGACGCAGAAAAATAATTTAAAGCCTGGAAAGAAACCGTACAGTTCCTGCGAGAACATTCAGGAAAATCTTGCTTTTGAGGAAAGTGAGCAGGATTTCACTTATGCTGAATCCGGTTGGAACTGCCCTCACTTAGAAGACATTGAATTGCATCACAATTCCCTTACATCCTTGCCCACTTGCCTGTTTGAATTACCGATGCTGAAATATTTGAACGTTTCCAAAAACGATATACAGTCTCTTCCCTTTGAGATGTGGACTGCTCCTGTGTTGAAATCGTTGGATCTGAAGGGAAATTTTGTGAGGAAGTTGCCAGTTATGAAAACAAGACGAGGTGGACGAGGGGGAAATGGAAAAACTTCAAGTCTGCCTCGTGCAAAAGTCCTGTCTTTGAGCAAAGATAACTTGCCTGTAGACATGAGCCAAGTGAATGGAACCTTAGAAACAAAAACAATGAAGACGAAAAGTGCTGAAGTAAATGGCAAAAAAAGTCACCCCCTGAAAATGTTTCACCACAGTCAACTGTGGGGAACAAGACATGGCGACGAAATTGAAGACTCGGATTCCGAGGAGGAAGACATTGATCCCACAAAAGGATCTTCTCTACAGAAGCTTGATTTGTCATCTAACCAAATAGTGAAGATCCCTTTAGGCTTGTCTTGCTTGGCTACTAATCTTGGAACGCTGAATTTATCAAACAACAATATTTCTGACGTCCCTTCGCTAGCTCTGTTTCCAACATCACTTGGGACGTTGGATTTGTCCCACAATAACTTGACTGCATTCCATCCTATTGCTGAAAATATCCCATATGGAAATGGGACAGAAAATCGATGTTACAATGTCATTGAAGGTCAAAGACCGAGTATGAGAAGAAGAATTAGCGCAGAGAATGGACTGCAAGTCGGCAGAGCAAGACTTTGCCGACATTCAAAGCACAGAATGTTGCCGCATCTGAAGCGGCTCGACTTGAACAACAACAAGCTTGAGGAAATTCACTTTATGCTTCCTCGAAATCGGCCTGCTTCGGTTGCCTCTGTCACTGACACATCACCAGCAAACTCAAGGAGTCCAGGGATTTTGTTTCCCAGCTTACAGTCTCTAACTCTCAGTAACAATGAGCTGTGGAGTTTACCAAGGGATGTAGGGGTTCTCTCCAAGCTTGGATCCCTGCATGTCAGTCACACGAAAATCACGCGTTTGCCACCTGAGGTTGGGCTTCTGTCGGAACTGTGGGACTTGCAGTACCAGGGGCTACAGCTGCAGGATATAGAGCCCAGTGTGCTGGAAAGGAAAAAGACCAAAGATATTGTAGGATACCTGAGATCAGTTTTGGAAAGGTCTGAGCCTTACCCAAGCATGAAACTCATGTTTGTTGGAGTTGCAAACATTGGTAAGACAACACTGTTGAACCAGCTCAGACAAGAGGGAACAGGCAGCTATCAGAACTCGCCTCCTGTCGGCTGGACGGAGAGGAAGGTCAAGAAAAAAAGAGCTGGATCAACCATTGGTCGCAGTAAGAAAGCTGAAGTGAATATCTCTACTGTTGGTGTTGATGTGTGTGACTGGATCTATCCAAAGAAAACTGATTTTGCCTTCGGACGAGCAGACAACAGACCAAGCATCAAATTTAGCACCTGGGACTTTGGGGGACAGCGCGAGTATTATGCCACACATCAGTGCTTCCTGTCTCATCGCTCACTTTACATAGCTATGTGGAAAGTCACAGATGGTGAACAAGGCGTGAATGAAATTGAGCCCTGGCTGCTGAATATTCAGGCTCGTGCCCCAGATTCTCCAGTCATCATTGTTGGAACACACTATGACATGCTGGAAGCGGACAAGCGATCAGAGTACCTCACAAACCTCAGGACCATGATATCAGACAACTACATTGCCACTGAGTTTGGTGGAAGAGTCCAGAATACACGGGAACGAGGCTTACCCAAGGTGATGGCCATGATCGAGGTCAGCTGTAAGACTGGGTACCACATCCGGGAATTAAGGCAACTGATTTACACCACTTCATTTGAGATCAAAGAGAAAGGAAGTCGTGTGTCTCTGTTAAAGACTCCGATTCCAGCAAGTTACATTGCAGTTGAAGACGCTGTTGGCGTGATTCGTGAGAGATGTTATCGTGACGATCAGACTCCTGTCCTTAAGTCTGAACAATTCAGTGCTGCCGTCGAAGCTGAGCTTGCGAGACAAAAGGTTCATTTGAGGGGACCGGAGGAACTACAGCAGGCGACAAGATTCCTACATGACAATGGTGTGTTGTTGCATTATGACGACCCATTGTTGCGTGACTTGTACTTCTTGGACCCTCAGTGGTTGTGTGACATGTTGGCGCACGTTGTCACGGTCAGGGAAGTCAACCCTCACATCAACAATGGTGTGATGAAGCGCTCCGACCTATCCCAGATCTTCCGGAGTGAACGTTTTCCAGCGAACCTAATGAGCCAGTACATTAACCTGTTAAGCAAGTTTGAAGTGGCGCTGCCATGGAGTGCGGAGTTTCTACTTGTCCCCTCCCTACTCCCTGACAGTCAGCAAGAGACCAACCAGCCCGTGGCAGCTGGGGTCAGTTCTGCAGTGGCTCAAGCCATGAATTCGACTGCTTATACCAAAGGCAAGGTTCTGCGGAGACAGTACGTCATGTCCTATGTGCCCAGCGGGTTCTGGCCGAGACTGGTCACCAGGGTGATCCCAGATGAACGAATCCGCGATGCAGTTAAGTCATGTTGTCAGCTGTCTCCTGATGGGCCAGTACAGGAGGGTGACAGAGACAAACTGGCTTCTGTGGCGCAGCCAGAGTGGTCATGCTGGAAGACTGGGGTTGAATTGTCGTGTTTTGGTGTGAAGTTGCTCAGGATTTGTGAGCTGGAAGGAAGACCATTTTATGGTGCACCAGATGACATCGCTAATCCATTACACTACAGACGTGAAGTACACGACACTACACGGTATTCCACAATTGAGGTTGTCACGCCGTGTGTCCGTATCAGAATGGAAAAGTTTGAGCAGCGCAAGAGACTGACTTCAAATAGGAAAACCCGGGGAAGGCCAGACGAAGACCGCCGCGAAGGATCAAAGTTGATTGGTTTCAAAGTGAAGTCTGTTTCAGACAGTTGCATCCAGTCCGCCGCTCGGCTGATCGCCATTACTGCTGAACATATGGACACACTCATCACCGATTGGTTCCCAGGCCTTGATGCCATCACGGTGCAAGGGTATCGCCTGGTTACCAGGATTATCCCGTGCCCCAAGTGCATCATGGCGGTGTGTGGGGTTAATCATGAGGAGAATGAGAAGGAAAGTGAAAGCGTAGCGATGAATGTCCCTCTGATATCATCTTCCGGTCCAGATAGCGGCATAAATCTGTCTACGACTGACGGAAGCAGTACTAGTGCTTCGCCTTGGCCGAGTCCTGTTCATGTGTCGAGAAGACCTGGTGCTAATGGAGAAGGGAGCCCGCCATCACAGAACAGTGGCGCGTCTGATATGCAACAAGACCTGAGCCATGGCTCTCCCCAGGCTCCGCCACGCGATCGTTTGTTATCGGAGCCTCAGAGATTCACGTTTGGATCCGTAAGCACCGAGCGGGAGACTGAGGACGAGAGTTCCAGTTGTTTTGACTACACGTCTGATCAGAGCTCCGACGGTCGCGGCAGTGAAAGCAGTCAATCATTCTCCCCAGAGAGGGCTGGCAGGAGAGGGAAATCGTCAAGAAAGGGCCGCAGGGCGAGAGGCAGTAGTGACAGCGAGGAAAGTGACGTGGCGGACATGAATACTAAGACCAAGAAGTCTGGTCAGGATAAGAAAAGTCAAGAGGAGCCAAAGAAAGGAAGTACTGACAGCACTGAGAGTTTTAAACGTGGATCGTGTAAGTACGGCTCGTTCAGAAAGCGGCCCACTAAAGATGACATGGTGATTTACTCATTTGAGTTTGAAGAATGTGTTCTTGCTGCGTATCACACTGAGCCCGTGGAATGCACCATGCATGGTCCGCTGGAGCTCAGAGAACTCGCCCCGGATGCTATGTTCGAAGACATCGCTCCCAATATGAACATTCAAGCGTCCGACATCACACGAGGGAAATTTCTGGGCAAAGGAACGTTCGGTTCAGTATTCCGCGGGGAACTGAAACAAACATCCGGGGACTCACTAACTATCGCCATGAAGATGCCGCTGAACAATGAAGTAGGAGAGGAGGCGCGGCCGGAAGAAGTGCAAATGGCTGCAGCAGCCATGAGAGCGTTGAAAGAAAATCCAACTATGGCACTTAATGATGCGTATAGGACCGTGCGTCAGGAGATGGCCATCCTTCTTCCCTTGAGACATCAGAATATCGTGTCGTTGCTAGGTTACTGTCTAAACCCGTTCTGTATGGTCTTGGAGTTCGCACCGCAAGGGGCCTTGGACCGAATTCTCGCCAACTACAAGAGAGCTGGAGTTCGCCTTAACGCCTACGTCATGCAAAAATGTATTGTACAGTGTGCTTCGGCGTTGAAGTATTTACACCGTCACCATATCATCTATCGAGACCTCAAGTCAGAAAACATTTTAGTGTGGCAGTTCCCAGCTCCCTCCGGCCCAGGTCAATCTAGTCACCAAGTTACCATCAAACTGGCTGACTACGGTATCAGCCGGTCAGCGGCGCTAGCGGGAATGAAGGGCCTGGGCGGTACTCCTGGTTTTATGGCCCCCGAGATTGAAAAGTATGTCGGGAAGGAGTTGTATACGGACAAAGTGGACTCGTTTTCGTTTGGAATGTACATTTATGAGCTAGTGACGCTACATCAGCCGTTTAATGATCTCAACCCTGCTCAGGTGAAACAGCTTATTGTGGAGGGTCACAGGCCGCCATTAACAGCTAAGGATAAGAAAGCTCCAGTGTTCGTCCTTGATCTCATGGCATGGTGCTGGCAGCAGGAAGCGGACAGGAGGCCGCCATCACATCACATCTCACTACTGGCTTCTGCAACTGAATTTCCTCGCCTCTCTGACGTCATCACCTTCGACAAGCAGCTGGGTTTGAACTGCGCGGTTACTGCTGGGTCACGTGTCAGTCAAAGCCGCGGGGCGGACGATAGAGCAAGTGTGGGCTCAGAAGTATGGCTCTGTCGGAGCGAGCTGAACGCTGGGATAGGTACAGGAAAAATCAGTGTTCTTGGTTACAGCCGTGGTCGATGTTATCACAAAAAGGAATTTTTCGTGGGCAAGTCCTGCATCCGGGTTGCTTGCAGTGTGGGAAGCACGGTGTGGCTTGGGACCGAGTCAGGAACGCTCCACGTGTTTTGTGCAATGACGTACAAGCAGCTCTGCAAAGGATCGATCCGCTCTAACAGATACATCTTAAACATGATCCACGTTCCGCGAGCGAACTGGGTTCTAGTGGCATTGGCGGATGGCCAGGTTCTGGCGTACAATGATAACATCTCTAATCACTACCATTACTCCGAGTCGGCGGGGCAGACCCCTGTTCATGAGCTCCTACCCAACCGGGTATACACCGGCAACGGAATCCCCATTCATTGCATGGCAGCTCTGCCGTTGAAGAAACCCCAGGGAAATGAAGTCCGACCGGAGGCTGCGGGGGATTCATCCGAGGACTCCGATGACCGGAACAGTCCGTGCGGTGACGAGTACATCTGCGAAGTTTGGTGTGGGCAGGAAAAAGGAAGAATAACAATTCTTGACGGTGAAGAGCTTCAGAAGATTTGCACCAAGTCAGCTGAAGACAGTGAACCCGACTCCTCGTCGCAAAGGGAACACAGCGTGTCCCATCTTGAGACCTGCCAGACGACCGGAACTACCATCAGCGGAGATGACCCCGTCGGTAGGTCCGTATGGGTGGCTTTGTTCCCCGGTACCCGCGTGTTCCGGTGGGATGCCCTGGAGAAGAAGATTGTACGCAGTGTGGATTGCTCACAACATCCACCAAGATTTGAAGGTCCAAAAGCCAAAGCACCGGTCAGGAGAGGCGCGGACCCGAATCCTTTGAGCGGTGAGTGACAAACAACTTTGGCGCTTTTATATTTAACCAACTGTCACGAAGCCTATATATCTTCAGGGAGTCCTTGCTATCGGTAATCTGTACTAAAAGAGATACCCTGCGATGTACGCAGTGTGCCAAAACTCCTCGGACGACACAAATAA

Protein

evm.model.Ap6.2301

MAAPVFVFQGELLHQAAIYDQKDLLKSLLKAGVHGEANSPDPRGLTPLHTAALHDSVECLKELLESKGDANIQSSPEDNCSTALHHAARNGHRRCLKVLIDAGARTDTKNKEGKTAMQIAFEKGNYECGDYLRTVEGIRKAAREEEVSQELFRSCTIGDLPRVTELLEEASTVTINKLYQGGCTLLYKACQGGHLEIVKLLLSRGADGSPNTITGIAPLYAACLSGNVELVRLMVQAMPHTINIPSKMDNSTALHVAAGEGNEEIVKSILQVPRDGEELTPCNKIDMSVRTSNGMTALHCAAQGGFVKVAEQLLDCRHKCAGPCQANLTISVNARSDMGHTALHNAVMVGYRDVVSLLIKHGADVNLCAGHQGENDTAASRVNLGSDMLTPLEIACQQGDLEMLKLLLNSGAEDADHKCLNSAILADNIEVIMILLQRGAQVDQEHKLHPSRTSSSPEEIWRLSAVPISILWNNMKLSKLEHQWIFTAASTINPYDGIVAGLHPSLKTITRVDVSSNKLSKLPIVLFQMPALKTLTASENAITGLPSLWLGGKKEMTQKNNLKPGKKPYSSCENIQENLAFEESEQDFTYAESGWNCPHLEDIELHHNSLTSLPTCLFELPMLKYLNVSKNDIQSLPFEMWTAPVLKSLDLKGNFVRKLPVMKTRRGGRGGNGKTSSLPRAKVLSLSKDNLPVDMSQVNGTLETKTMKTKSAEVNGKKSHPLKMFHHSQLWGTRHGDEIEDSDSEEEDIDPTKGSSLQKLDLSSNQIVKIPLGLSCLATNLGTLNLSNNNISDVPSLALFPTSLGTLDLSHNNLTAFHPIAENIPYGNGTENRCYNVIEGQRPSMRRRISAENGLQVGRARLCRHSKHRMLPHLKRLDLNNNKLEEIHFMLPRNRPASVASVTDTSPANSRSPGILFPSLQSLTLSNNELWSLPRDVGVLSKLGSLHVSHTKITRLPPEVGLLSELWDLQYQGLQLQDIEPSVLERKKTKDIVGYLRSVLERSEPYPSMKLMFVGVANIGKTTLLNQLRQEGTGSYQNSPPVGWTERKVKKKRAGSTIGRSKKAEVNISTVGVDVCDWIYPKKTDFAFGRADNRPSIKFSTWDFGGQREYYATHQCFLSHRSLYIAMWKVTDGEQGVNEIEPWLLNIQARAPDSPVIIVGTHYDMLEADKRSEYLTNLRTMISDNYIATEFGGRVQNTRERGLPKVMAMIEVSCKTGYHIRELRQLIYTTSFEIKEKGSRVSLLKTPIPASYIAVEDAVGVIRERCYRDDQTPVLKSEQFSAAVEAELARQKVHLRGPEELQQATRFLHDNGVLLHYDDPLLRDLYFLDPQWLCDMLAHVVTVREVNPHINNGVMKRSDLSQIFRSERFPANLMSQYINLLSKFEVALPWSAEFLLVPSLLPDSQQETNQPVAAGVSSAVAQAMNSTAYTKGKVLRRQYVMSYVPSGFWPRLVTRVIPDERIRDAVKSCCQLSPDGPVQEGDRDKLASVAQPEWSCWKTGVELSCFGVKLLRICELEGRPFYGAPDDIANPLHYRREVHDTTRYSTIEVVTPCVRIRMEKFEQRKRLTSNRKTRGRPDEDRREGSKLIGFKVKSVSDSCIQSAARLIAITAEHMDTLITDWFPGLDAITVQGYRLVTRIIPCPKCIMAVCGVNHEENEKESESVAMNVPLISSSGPDSGINLSTTDGSSTSASPWPSPVHVSRRPGANGEGSPPSQNSGASDMQQDLSHGSPQAPPRDRLLSEPQRFTFGSVSTERETEDESSSCFDYTSDQSSDGRGSESSQSFSPERAGRRGKSSRKGRRARGSSDSEESDVADMNTKTKKSGQDKKSQEEPKKGSTDSTESFKRGSCKYGSFRKRPTKDDMVIYSFEFEECVLAAYHTEPVECTMHGPLELRELAPDAMFEDIAPNMNIQASDITRGKFLGKGTFGSVFRGELKQTSGDSLTIAMKMPLNNEVGEEARPEEVQMAAAAMRALKENPTMALNDAYRTVRQEMAILLPLRHQNIVSLLGYCLNPFCMVLEFAPQGALDRILANYKRAGVRLNAYVMQKCIVQCASALKYLHRHHIIYRDLKSENILVWQFPAPSGPGQSSHQVTIKLADYGISRSAALAGMKGLGGTPGFMAPEIEKYVGKELYTDKVDSFSFGMYIYELVTLHQPFNDLNPAQVKQLIVEGHRPPLTAKDKKAPVFVLDLMAWCWQQEADRRPPSHHISLLASATEFPRLSDVITFDKQLGLNCAVTAGSRVSQSRGADDRASVGSEVWLCRSELNAGIGTGKISVLGYSRGRCYHKKEFFVGKSCIRVACSVGSTVWLGTESGTLHVFCAMTYKQLCKGSIRSNRYILNMIHVPRANWVLVALADGQVLAYNDNISNHYHYSESAGQTPVHELLPNRVYTGNGIPIHCMAALPLKKPQGNEVRPEAAGDSSEDSDDRNSPCGDEYICEVWCGQEKGRITILDGEELQKICTKSAEDSEPDSSSQREHSVSHLETCQTTGTTISGDDPVGRSVWVALFPGTRVFRWDALEKKIVRSVDCSQHPPRFEGPKAKAPVRRGADPNPLSGE*

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9TZM3	Leucine-rich repeat serine/threonine-protein kinase 1 OS=Caenorhabditis elegans OX=6239 GN=lrk-1 PE=1 SV=6
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002644 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477 all species →	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF16095 all species →	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR020859 all species →	Domain	Roc domain	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR032171 all species →	Domain	C-terminal of Roc (COR) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24198 all species →	ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap6.2301.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap6.2301 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples

0TPM > 0

4Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole organism · cold control	14	0	0.00	0.00
whole organism · heat control	12	0	0.00	0.00
whole organism · cold challenge	12	0	0.00	0.00
whole organism · heat challenge	11	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR10674714	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674715	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674724	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674733	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674734	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674735	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674736	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674737	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674739	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674743	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674746	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674747	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674748	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674750	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674706	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674707	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674708	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674717	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674718	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674720	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674721	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674725	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674731	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674741	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674752	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674753	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674711	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674712	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674713	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674722	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674723	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674730	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674732	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674738	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674740	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674744	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674745	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674749	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674709	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674710	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674716	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674719	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674726	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674727	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674728	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674729	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674742	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674751	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674754	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.