Detailed information of evm.model.Ap6.2347 in Astrangia poculata

Genomic Location: Ap6:22980091...22981080
NR annotation: XP_020622024.1, ribosomal RNA-processing protein 14-C-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008957 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15459
all species →		RRP1460S ribosome biogenesis protein Rrp14FamilyInterproscan
PF04935
all species →		SURF6Surfeit locus protein 6FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007019
all species →		FamilySurfeit locus 6Interproscan
IPR029188
all species →		DomainRibosomal RNA-processing protein 14, N-terminalInterproscan
IPR029190
all species →		DomainRibosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14369
all species →		SURFEIT LOCUS PROTEIN 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0042273
all species →		Biological Processribosomal large subunit biogenesisInterproscan
GO:0042274
all species →		Biological Processribosomal small subunit biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2347.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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