Gene detail

Detailed information of evm.model.Ap6.2427 in Astrangia poculata

Genomic Location: Ap6:24002856...24012898
NR annotation: CAH3120917.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PEI7	CTP synthase 1 OS=Danio rerio OX=7955 GN=ctps1 PE=1 SV=1
Q5XHA8	CTP synthase 1-A OS=Xenopus laevis OX=8355 GN=ctps1-a PE=2 SV=1
Q7ZXP9	CTP synthase 1-B OS=Xenopus laevis OX=8355 GN=ctps1-b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002829 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00117 all species →	GATase	Glutamine amidotransferase class-I	Domain	Interproscan
PF06418 all species →	CTP_synth_N	CTP synthase N-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029062 all species →	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR004468 all species →	Family	CTP synthase	Interproscan
IPR017926 all species →	Domain	Glutamine amidotransferase	Interproscan
IPR017456 all species →	Domain	CTP synthase, N-terminal	Interproscan
IPR033828 all species →	Domain	CTP synthase GATase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11550 all species →	CTP SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003883 all species →	Molecular Function	CTP synthase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0006241 all species →	Biological Process	CTP biosynthetic process	Interproscan
GO:0019856 all species →	Biological Process	pyrimidine nucleobase biosynthetic process	Interproscan
GO:0042802 all species →	Molecular Function	identical protein binding	Interproscan
GO:0097268 all species →	Cellular Component	cytoophidium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01937	pyrG, CTPS; CTP synthase	EC:6.3.4.2	Pyrimidine metabolism	ko00240	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.