Detailed information of evm.model.Ap6.2442 in Astrangia poculata

Genomic Location: Ap6:24258422...24259081
NR annotation: XP_020626027.1, transcription factor Sox-21-B-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W7R6Transcription factor SOX-14 OS=Gallus gallus OX=9031 GN=SOX14 PE=2 SV=1
O95416Transcription factor SOX-14 OS=Homo sapiens OX=9606 GN=SOX14 PE=1 SV=1
P61259Transcription factor SOX-14 OS=Macaca fascicularis OX=9541 GN=SOX14 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000488 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR050140
all species →		FamilySRY-related HMG-box transcription factorsInterproscan
IPR009071
all species →		DomainHigh mobility group box domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270
all species →		SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap6.2442. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09267SOX1S; transcription factor SOX1/3/14/21 (SOX group B)-Transcription factorsko03000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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