Detailed information of evm.model.Ap6.2469 in Astrangia poculata

Genomic Location: Ap6:24537602...24539526
NR annotation: XP_015780547.1, PREDICTED: paired box protein Pax-5-like [Acropora digitifera]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9PUK5Paired box protein Pax-8 OS=Xenopus laevis OX=8355 GN=pax8 PE=2 SV=1
Q90268Paired box protein Pax-2a OS=Danio rerio OX=7955 GN=pax2a PE=2 SV=2
P32114Paired box protein Pax-2 OS=Mus musculus OX=10090 GN=Pax2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000476 (this species only)
Transcription factor familyPAX · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292
all species →		PAX'Paired box' domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001523
all species →		DomainPaired domainInterproscan
IPR043565
all species →		FamilyPAX familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45636
all species →		PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2469.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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