Detailed information of evm.model.Ap6.2551 in Astrangia poculata

Genomic Location: Ap6:25501342...25505387
NR annotation: XP_020605644.1, proteasome assembly chaperone 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RV13Proteasome assembly chaperone 1 OS=Nematostella vectensis OX=45351 GN=psmg1 PE=3 SV=1
A4IHY1Proteasome assembly chaperone 1 OS=Xenopus tropicalis OX=8364 GN=psmg1 PE=2 SV=1
Q6DG91Proteasome assembly chaperone 1 OS=Danio rerio OX=7955 GN=psmg1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009274 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16094
all species →		PAC1Proteasome assembly chaperone 4FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038389
all species →		Homologous_superfamilyProteasome assembly chaperone 2 superfamilyInterproscan
IPR016565
all species →		FamilyProteasome assembly chaperone 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15069
all species →		PROTEASOME ASSEMBLY CHAPERONE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0043248
all species →		Biological Processproteasome assemblyInterproscan
GO:0070628
all species →		Molecular Functionproteasome bindingInterproscan
GO:0080129
all species →		Biological Processproteasome core complex assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11875PSMG1, DSCR2, PAC1; proteasome assembly chaperone 1-Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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