Detailed information of evm.model.Ap6.2565 in Astrangia poculata

Genomic Location: Ap6:25682424...25687489
NR annotation: XP_020605615.1, discoidin domain-containing receptor 2-like, partial [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q16832Discoidin domain-containing receptor 2 OS=Homo sapiens OX=9606 GN=DDR2 PE=1 SV=2
O88783Coagulation factor V OS=Mus musculus OX=10090 GN=F5 PE=1 SV=1
O18806Coagulation factor VIII OS=Canis lupus familiaris OX=9615 GN=F8 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008464 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00754
all species →		F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00040
all species →		fn2Fibronectin type II domainDomainInterproscan
PF00594
all species →		GlaVitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017857
all species →		Homologous_superfamilyCoagulation factor-like, Gla domain superfamilyInterproscan
IPR000294
all species →		DomainGamma-carboxyglutamic acid-rich (GLA) domainInterproscan
IPR000562
all species →		DomainFibronectin type II domainInterproscan
IPR000421
all species →		DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR035972
all species →		Homologous_superfamilyGamma-carboxyglutamic acid-rich (GLA) domain superfamilyInterproscan
IPR013806
all species →		Homologous_superfamilyKringle-like foldInterproscan
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036943
all species →		Homologous_superfamilyFibronectin type II domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24543
all species →		MULTICOPPER OXIDASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2565.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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