Detailed information of evm.model.Ap6.2578 in Astrangia poculata

Genomic Location: Ap6:25835121...25836806
NR annotation: KAJ7394415.1, hypothetical protein OS493_000224 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49347Concanavalin B OS=Canavalia ensiformis OX=3823 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001026 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap6.2578. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001223
all species →		DomainGlycoside hydrolase family 18, catalytic domainInterproscan
IPR050542
all species →		FamilyGlycosyl Hydrolase 18 Family ChitinasesInterproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45708
all species →		ENDOCHITINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →		Biological Processcarbohydrate metabolic processInterproscan
GO:0004568
all species →		Molecular Functionchitinase activityInterproscan
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2578.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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