Detailed information of evm.model.Ap6.2723 in Astrangia poculata

Genomic Location: Ap6:27365610...27385990
NR annotation: CAH3121406.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9TZD0Lateral signaling target protein 2 OS=Caenorhabditis elegans OX=6239 GN=lst-2 PE=2 SV=2
A8XJZ8Lateral signaling target protein 2 OS=Caenorhabditis briggsae OX=6238 GN=lst-2 PE=3 SV=1
Q960X8Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Drosophila melanogaster OX=7227 GN=Hrs PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002311 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01363
all species →		FYVEFYVE zinc fingerDomainInterproscan
PF12796
all species →		Ank_2Ankyrin repeats (3 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR000306
all species →		DomainFYVE zinc fingerInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR002110
all species →		RepeatAnkyrin repeatInterproscan
IPR017455
all species →		DomainZinc finger, FYVE-relatedInterproscan
IPR050776
all species →		FamilyAnkyrin Repeat and Cyclin-Dependent Kinase InhibitorInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24201
all species →		ANK_REP_REGION DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.2723.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP