Detailed information of evm.model.Ap6.2915 in Astrangia poculata

Genomic Location: Ap6:29680696...29686400
NR annotation: KAJ7321762.1, hypothetical protein OS493_033870 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9X2483-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=fabG PE=3 SV=1
A7AZH23beta-hydroxysteroid dehydrogenase OS=Mediterraneibacter gnavus (strain ATCC 29149 / DSM 114966 / JCM 6515 / VPI C7-9) OX=411470 GN=RUMGNA_00694 PE=1 SV=1
Q9WYG0Uncharacterized oxidoreductase TM_0325 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0325 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001090 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →		adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →		FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904
all species →		Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43975
all species →		ZGC:101858Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11153RDH12; retinol dehydrogenase 12EC:1.1.1.300
Retinol metabolismko00830deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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