Genomic Location: Ap6:29795611...29828962
NR annotation: XP_020622762.1, uncharacterized protein LOC110060335 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap6.2924 |
| Transcript |
| evm.model.Ap6.2924 |
| Protein |
| evm.model.Ap6.2924 |
| UniProt accession | Description |
|---|---|
| Q6V0I7 | Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2 |
| Q2PZL6 | Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2 |
| Q14517 | Protocadherin Fat 1 OS=Homo sapiens OX=9606 GN=FAT1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0011362 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00055 all species → | Laminin_N | Laminin N-terminal (Domain VI) | Domain | Interproscan |
| PF13385 all species → | Laminin_G_3 | Concanavalin A-like lectin/glucanases superfamily | Domain | Interproscan |
| PF00028 all species → | Cadherin | Cadherin domain | Domain | Interproscan |
| PF00102 all species → | Y_phosphatase | Protein-tyrosine phosphatase | Domain | Interproscan |
| PF16070 all species → | TMEM132 | Transmembrane protein family 132 | Family | Interproscan |
| PF00041 all species → | fn3 | Fibronectin type III domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002126 all species → | Domain | Cadherin-like | Interproscan |
| IPR015919 all species → | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR029021 all species → | Homologous_superfamily | Protein-tyrosine phosphatase-like | Interproscan |
| IPR016130 all species → | Active_site | Protein-tyrosine phosphatase, active site | Interproscan |
| IPR008211 all species → | Domain | Laminin, N-terminal | Interproscan |
| IPR036116 all species → | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036439 all species → | Homologous_superfamily | Dockerin domain superfamily | Interproscan |
| IPR000242 all species → | Domain | Tyrosine-specific protein phosphatase, PTPase domain | Interproscan |
| IPR013320 all species → | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR003961 all species → | Domain | Fibronectin type III | Interproscan |
| IPR039808 all species → | Family | Cadherin | Interproscan |
| IPR020894 all species → | Conserved_site | Cadherin conserved site | Interproscan |
| IPR003595 all species → | Domain | Protein-tyrosine phosphatase, catalytic | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR000387 all species → | Domain | Tyrosine-specific protein phosphatases domain | Interproscan |
| IPR031437 all species → | Domain | Transmembrane protein family 132, middle domain | Interproscan |
| IPR018247 all species → | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24027 all species → | CADHERIN-23 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005509 all species → | Molecular Function | calcium ion binding | Interproscan |
| GO:0007156 all species → | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 all species → | Cellular Component | membrane | Interproscan |
| GO:0016311 all species → | Biological Process | dephosphorylation | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000272 all species → | Biological Process | polysaccharide catabolic process | Interproscan |
| GO:0004725 all species → | Molecular Function | protein tyrosine phosphatase activity | Interproscan |
| GO:0006470 all species → | Biological Process | protein dephosphorylation | Interproscan |
| GO:0000902 all species → | Biological Process | cell morphogenesis | Interproscan |
| GO:0005912 all species → | Cellular Component | adherens junction | Interproscan |
| GO:0007043 all species → | Biological Process | cell-cell junction assembly | Interproscan |
| GO:0007275 all species → | Biological Process | multicellular organism development | Interproscan |
| GO:0016339 all species → | Biological Process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules | Interproscan |
| GO:0016342 all species → | Cellular Component | catenin complex | Interproscan |
| GO:0034332 all species → | Biological Process | adherens junction organization | Interproscan |
| GO:0044331 all species → | Biological Process | cell-cell adhesion mediated by cadherin | Interproscan |
| GO:0045296 all species → | Molecular Function | cadherin binding | Interproscan |
| GO:0098609 all species → | Biological Process | cell-cell adhesion | Interproscan |
| GO:0098742 all species → | Biological Process | cell-cell adhesion via plasma-membrane adhesion molecules | Interproscan |
| GO:0005886 all species → | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 all species → | Biological Process | cell adhesion | Interproscan |
evm.model.Ap6.2924.
