Detailed information of evm.model.Ap6.3069 in Astrangia poculata

Genomic Location: Ap6:31328449...31336427
NR annotation: XP_027059173.1, spermine synthase-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZA5Spermine synthase OS=Bos taurus OX=9913 GN=SMS PE=2 SV=1
P52788Spermine synthase OS=Homo sapiens OX=9606 GN=SMS PE=1 SV=2
P97355Spermine synthase OS=Mus musculus OX=10090 GN=Sms PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003794 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17284
all species →		Spermine_synt_NSpermidine synthase tetramerisation domainDomainInterproscan
PF01564
all species →		Spermine_synthSpermine/spermidine synthase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035246
all species →		DomainSpermidine synthase, tetramerisation domainInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR015576
all species →		FamilySpermine synthase, animalInterproscan
IPR030374
all species →		DomainPolyamine biosynthesis domainInterproscan
IPR037163
all species →		Homologous_superfamilySpermidine synthase, tetramerisation domain superfamilyInterproscan
IPR030373
all species →		Conserved_sitePolyamine biosynthesis domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46315
all species →		SPERMINE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006597
all species →		Biological Processspermine biosynthetic processInterproscan
GO:0016768
all species →		Molecular Functionspermine synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00802SMS; spermine synthaseEC:2.5.1.22
Glutathione metabolismko00480deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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