Gene detail

Detailed information of evm.model.Ap6.3093 in Astrangia poculata

Genomic Location: Ap6:31618024...31621902
NR annotation: XP_022809068.1, uncharacterized protein LOC111346047 [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap6.3093

atggaggaaaatattgccaatagaaggtggatttcaacaagaaccgaagaccacagacaatgtatcagagaaattgaagaacttcttatccacatcgtaaagacgactggaggaggaggaaggctccatttcgaactggtggaccgcatagtgcaacatctaacgagtcgtaacttatcaaccctggtagataatgctgatgcagaggtacatgtactggaatacatcaagagttgcctccctgcagaaagtcccttgattgtgagtcttgcagatgaaagtctttcccttaggtacgaagagtcaactctcgactgtagtgcagaattggaagattcattggctcaggtgaaaaacaaaataaaaacatcctggaacatcacggtactcgatctctcgagacgttgcttttcgtctaagactgagctccttgaagtatgcgaatctgcgaagatggtaaaaaggctcattctcagggatattcaaattcagtcttgtgacgaagaatcacttacgcattttccactgattgagaggatcacgtggtattgtccagcgctggaagaagtcgacataactggttgttctccatctgttcttggtgaactttttcaaacagagagaagtccttatgaaagcacatctggcgtccatgttatagacttgttatcgaacaaacctgaggcgaaggagctcctcatgccctcacatattaccagtgacgtgccagacgttgcctgcagaataaaaaaactagttcaggaaggtgttccaactaacatcagctatgacggctggtctcttctccatacagccgcagttattggagacgtagaccttgtgacctggttgctggagaaaagtgtcagtcataaattccacgtagcgagctcgaatagaccaacacctctggaaatggcgatacattgtcacaacgcacctatcgtgaaacaactgcttcacaaaacagattatgtcgaccctgccaagctcgtggatctctgtttcctctcgcagttagtgtcaaaagagcctggtgtgccacacccaaatcactctagtcgctgtgatccgttacaagttttccagctgtttattgacagaagcagcttggattacaaggcctctcttcttgttgaagtgagtaaagttatcgaaagaataccgccaggggaactaaacgaaaagacgtgttggacggaagactccatttccgagatgttcaaggctctggtttcatcagaattgtcgcccaatatacccattaaagatcttggtggtaagactccactgatgtgtgctgtctcacgccctgcgttggtaaaggcgctcttgaatcttggagcaaatagccatgcctttgatgaagagggtaacacggctttgttttacgccgtagccaaagctgcagtcgaagcagaagatgaatacttcaagtcttcaaaacttctcttggaatatagtgctgacgcaaatgttaaaaacaagtatggacagactcctcttctctatgacgcttcaaatgttgaagagttgtctcaagggtgtaatttacaaatctggcaactgcttgttgaatcaggagctgaaattgctgcgctggataaagaacgaaaatccttgatgcatcttgtcatagaccgcacaaaaaggtacctggagcagcttccaaactccagtccagaagaagaaatctcgaatttatcccagcgtgctgttgcccattgtattcaacgaacaacgtttgtttcaaagcacaacgataagcttgtgaggtcaagagacagtatgggtaacacgcccctccatcttctggcagaacatagctccccttgcaccgatgacatgttagccattgcaaacgccctgatcgaggttggcagcaatgtgaaagtgacaaacgatcatggcaagactccgttgcacttagctaaaacgtggagtatggctaaattccttttggagcaaggagccaaacctaacgcctttgatgacgtggcctgtactccgctactgtccagagcgaaagaggccaaccttgaaagaatgccagcgttggaaatgcttagaaaatggtcagaaggtgtgaactttgggatggatctgtggcaggaagacagtaacggccaaaacgtctttcacgttttaatggagagtggtaacttcgatgatgtgaagccgttcattgatgcaagcattaacaacgacagggaagccatcctcagaaccgacagtaatggcaacagcattttacatcatttatgtaattacaacgacaccagagtgttaccattgattgattttgcccttcaacatggtgcaaacgtgaatgctcagaatatgaacggtgacactgcacttcacaatacctgtagaagcatacaacgccttcctaagcgaaaagggcacaattccgtgcaatggaaagtgattcccaagcttctctcctataaagcacgctgtaacttgaaaaacaatagaaacgctaccgtggaggatattgcttggctcaataagaagttggtaaaggccctcaatagggaggtaacccatctggagccacctccaatttacccatggattcaacaatcgcagagccatcatatcctgctgtttgcagctgccagaggacagaattgccaaaagattggcaattactgctacaattatgaacctattggcttaggtgcgtttagcaacgtgtatgcggcgattgatattcaagacggccgagaggtcgccctgaaacgaacggacacgtacaggttgaaaacgcggcaagacgacagagaagtaaacacacttctccagctcacaagttgcctccagattgtgaactacatgacttttactagagacgccgatttcacatggatcgctctagaactgatggagggtacgttggacgaactgttgcagcagggaattcatcaagattcctttcttaagctctgcaaggatgtcgtgctgggagtcgaatatcttcacacacataacatcttacaccgggatctcaagcctaacaacgtcttgtacacacgtgagccttgcctgaagattgctgactttggactcagcaaaaaactcggacctggtcatcagggatcaagcgttctccataccaatgctggctccagatgttggatggcacctgagctgctgttacaattgtcaactggacactttcagcacacctatgcctctgatgtgtttgcttgtggcctcataattcattacatgctggccgatagacgtcacccatttaacgcaactaccactgatcaccaccgttcaattgccgattgtaatgcggtagagacaaacattgcaactggtaacagaacactaagtccagatctttctgacgaagtcacggacctgctttcacattgcttaagctcgaacagcaacgaccgcccaacagcatcagaggttttgaagcatccattcttttggtccgatgacaaaaaagtgcgtttcgtttgcgcgattgccaatcaaagcgaagttggcacttttggaggaaggggaactgtagcttctcccgtagagctggaaatcgagaataacttggcctccatgttccatccaacttgggatgtccttttcccagccgtgtacgcggaaatgacgtcaagcgcaagaggacgccgttatgtcacgtcgtcaggtgtgcacctgataaggttcatccgaaatgcgtacgctcatgtatctgattgggcacggccaaccggttttcagaaagacctactgcgaaatcggatctttcttaaaacgttgcccaatctttttatggtggtcttcaacgccgtgaagaaggggaactgggacacttctcgcgcagaaatagtatcagtcatacagtcgcgtgactag

Transcript

evm.model.Ap6.3093

ATGGAGGAAAATATTGCCAATAGAAGGTGGATTTCAACAAGAACCGAAGACCACAGACAATGTATCAGAGAAATTGAAGAACTTCTTATCCACATCGTAAAGACGACTGGAGGAGGAGGAAGGCTCCATTTCGAACTGGTGGACCGCATAGTGCAACATCTAACGAGTCGTAACTTATCAACCCTGGTAGATAATGCTGATGCAGAGGTACATGTACTGGAATACATCAAGAGTTGCCTCCCTGCAGAAAGTCCCTTGATTGTGAGTCTTGCAGATGAAAGTCTTTCCCTTAGGTACGAAGAGTCAACTCTCGACTGTAGTGCAGAATTGGAAGATTCATTGGCTCAGGTGAAAAACAAAATAAAAACATCCTGGAACATCACGGTACTCGATCTCTCGAGACGTTGCTTTTCGTCTAAGACTGAGCTCCTTGAAGTATGCGAATCTGCGAAGATGGTAAAAAGGCTCATTCTCAGGGATATTCAAATTCAGTCTTGTGACGAAGAATCACTTACGCATTTTCCACTGATTGAGAGGATCACGTGGTATTGTCCAGCGCTGGAAGAAGTCGACATAACTGGTTGTTCTCCATCTGTTCTTGGTGAACTTTTTCAAACAGAGAGAAGTCCTTATGAAAGCACATCTGGCGTCCATGTTATAGACTTGTTATCGAACAAACCTGAGGCGAAGGAGCTCCTCATGCCCTCACATATTACCAGTGACGTGCCAGACGTTGCCTGCAGAATAAAAAAACTAGTTCAGGAAGGTGTTCCAACTAACATCAGCTATGACGGCTGGTCTCTTCTCCATACAGCCGCAGTTATTGGAGACGTAGACCTTGTGACCTGGTTGCTGGAGAAAAGTGTCAGTCATAAATTCCACGTAGCGAGCTCGAATAGACCAACACCTCTGGAAATGGCGATACATTGTCACAACGCACCTATCGTGAAACAACTGCTTCACAAAACAGATTATGTCGACCCTGCCAAGCTCGTGGATCTCTGTTTCCTCTCGCAGTTAGTGTCAAAAGAGCCTGGTGTGCCACACCCAAATCACTCTAGTCGCTGTGATCCGTTACAAGTTTTCCAGCTGTTTATTGACAGAAGCAGCTTGGATTACAAGGCCTCTCTTCTTGTTGAAGTGAGTAAAGTTATCGAAAGAATACCGCCAGGGGAACTAAACGAAAAGACGTGTTGGACGGAAGACTCCATTTCCGAGATGTTCAAGGCTCTGGTTTCATCAGAATTGTCGCCCAATATACCCATTAAAGATCTTGGTGGTAAGACTCCACTGATGTGTGCTGTCTCACGCCCTGCGTTGGTAAAGGCGCTCTTGAATCTTGGAGCAAATAGCCATGCCTTTGATGAAGAGGGTAACACGGCTTTGTTTTACGCCGTAGCCAAAGCTGCAGTCGAAGCAGAAGATGAATACTTCAAGTCTTCAAAACTTCTCTTGGAATATAGTGCTGACGCAAATGTTAAAAACAAGTATGGACAGACTCCTCTTCTCTATGACGCTTCAAATGTTGAAGAGTTGTCTCAAGGGTGTAATTTACAAATCTGGCAACTGCTTGTTGAATCAGGAGCTGAAATTGCTGCGCTGGATAAAGAACGAAAATCCTTGATGCATCTTGTCATAGACCGCACAAAAAGGTACCTGGAGCAGCTTCCAAACTCCAGTCCAGAAGAAGAAATCTCGAATTTATCCCAGCGTGCTGTTGCCCATTGTATTCAACGAACAACGTTTGTTTCAAAGCACAACGATAAGCTTGTGAGGTCAAGAGACAGTATGGGTAACACGCCCCTCCATCTTCTGGCAGAACATAGCTCCCCTTGCACCGATGACATGTTAGCCATTGCAAACGCCCTGATCGAGGTTGGCAGCAATGTGAAAGTGACAAACGATCATGGCAAGACTCCGTTGCACTTAGCTAAAACGTGGAGTATGGCTAAATTCCTTTTGGAGCAAGGAGCCAAACCTAACGCCTTTGATGACGTGGCCTGTACTCCGCTACTGTCCAGAGCGAAAGAGGCCAACCTTGAAAGAATGCCAGCGTTGGAAATGCTTAGAAAATGGTCAGAAGGTGTGAACTTTGGGATGGATCTGTGGCAGGAAGACAGTAACGGCCAAAACGTCTTTCACGTTTTAATGGAGAGTGGTAACTTCGATGATGTGAAGCCGTTCATTGATGCAAGCATTAACAACGACAGGGAAGCCATCCTCAGAACCGACAGTAATGGCAACAGCATTTTACATCATTTATGTAATTACAACGACACCAGAGTGTTACCATTGATTGATTTTGCCCTTCAACATGGTGCAAACGTGAATGCTCAGAATATGAACGGTGACACTGCACTTCACAATACCTGTAGAAGCATACAACGCCTTCCTAAGCGAAAAGGGCACAATTCCGTGCAATGGAAAGTGATTCCCAAGCTTCTCTCCTATAAAGCACGCTGTAACTTGAAAAACAATAGAAACGCTACCGTGGAGGATATTGCTTGGCTCAATAAGAAGTTGGTAAAGGCCCTCAATAGGGAGGTAACCCATCTGGAGCCACCTCCAATTTACCCATGGATTCAACAATCGCAGAGCCATCATATCCTGCTGTTTGCAGCTGCCAGAGGACAGAATTGCCAAAAGATTGGCAATTACTGCTACAATTATGAACCTATTGGCTTAGGTGCGTTTAGCAACGTGTATGCGGCGATTGATATTCAAGACGGCCGAGAGGTCGCCCTGAAACGAACGGACACGTACAGGTTGAAAACGCGGCAAGACGACAGAGAAGTAAACACACTTCTCCAGCTCACAAGTTGCCTCCAGATTGTGAACTACATGACTTTTACTAGAGACGCCGATTTCACATGGATCGCTCTAGAACTGATGGAGGGTACGTTGGACGAACTGTTGCAGCAGGGAATTCATCAAGATTCCTTTCTTAAGCTCTGCAAGGATGTCGTGCTGGGAGTCGAATATCTTCACACACATAACATCTTACACCGGGATCTCAAGCCTAACAACGTCTTGTACACACGTGAGCCTTGCCTGAAGATTGCTGACTTTGGACTCAGCAAAAAACTCGGACCTGGTCATCAGGGATCAAGCGTTCTCCATACCAATGCTGGCTCCAGATGTTGGATGGCACCTGAGCTGCTGTTACAATTGTCAACTGGACACTTTCAGCACACCTATGCCTCTGATGTGTTTGCTTGTGGCCTCATAATTCATTACATGCTGGCCGATAGACGTCACCCATTTAACGCAACTACCACTGATCACCACCGTTCAATTGCCGATTGTAATGCGGTAGAGACAAACATTGCAACTGGTAACAGAACACTAAGTCCAGATCTTTCTGACGAAGTCACGGACCTGCTTTCACATTGCTTAAGCTCGAACAGCAACGACCGCCCAACAGCATCAGAGGTTTTGAAGCATCCATTCTTTTGGTCCGATGACAAAAAAGTGCGTTTCGTTTGCGCGATTGCCAATCAAAGCGAAGTTGGCACTTTTGGAGGAAGGGGAACTGTAGCTTCTCCCGTAGAGCTGGAAATCGAGAATAACTTGGCCTCCATGTTCCATCCAACTTGGGATGTCCTTTTCCCAGCCGTGTACGCGGAAATGACGTCAAGCGCAAGAGGACGCCGTTATGTCACGTCGTCAGGTGTGCACCTGATAAGGTTCATCCGAAATGCGTACGCTCATGTATCTGATTGGGCACGGCCAACCGGTTTTCAGAAAGACCTACTGCGAAATCGGATCTTTCTTAAAACGTTGCCCAATCTTTTTATGGTGGTCTTCAACGCCGTGAAGAAGGGGAACTGGGACACTTCTCGCGCAGAAATAGTATCAGTCATACAGTCGCGTGACTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q09499	Serine/threonine-protein kinase/endoribonuclease ire-1 OS=Caenorhabditis elegans OX=6239 GN=ire-1 PE=1 SV=2
O94537	Sensor for unfolded proteins in the ER ire1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ire1 PE=1 SV=1
Q9FZ36	Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana OX=3702 GN=ANP2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000780 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF06479 all species →	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR045133 all species →	Family	Serine/threonine-protein kinase/endoribonuclease IRE1/2-like	Interproscan
IPR038357 all species →	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR010513 all species →	Domain	KEN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13954 all species →	IRE1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004521 all species →	Molecular Function	RNA endonuclease activity	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0030968 all species →	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0036498 all species →	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051082 all species →	Molecular Function	unfolded protein binding	Interproscan
GO:0070059 all species →	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:1990604 all species →	Cellular Component	IRE1-TRAF2-ASK1 complex	Interproscan
GO:0004540 all species →	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397 all species →	Biological Process	mRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap6.3093.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.