Detailed information of evm.model.Ap6.3176 in Astrangia poculata

Genomic Location: Ap6:32890325...32902586
NR annotation: XP_020622808.1, uncharacterized protein LOC110060379 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008798 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02732
all species →		ERCC4ERCC4 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR011335
all species →		Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR047416
all species →		DomainMUS81, XPF-like nuclease domainInterproscan
IPR047417
all species →		DomainMUS81, winged helix domainInterproscan
IPR033309
all species →		FamilyCrossover junction endonuclease Mus81Interproscan
IPR006166
all species →		DomainERCC4 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13451
all species →		CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000712
all species →		Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000727
all species →		Biological Processdouble-strand break repair via break-induced replicationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006302
all species →		Biological Processdouble-strand break repairInterproscan
GO:0006308
all species →		Biological ProcessDNA catabolic processInterproscan
GO:0008821
all species →		Molecular Functioncrossover junction DNA endonuclease activityInterproscan
GO:0031573
all species →		Biological Processmitotic intra-S DNA damage checkpoint signalingInterproscan
GO:0048257
all species →		Molecular Function3'-flap endonuclease activityInterproscan
GO:0048476
all species →		Cellular ComponentHolliday junction resolvase complexInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.3176.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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