Detailed information of evm.model.Ap6.3269 in Astrangia poculata

Genomic Location: Ap6:33810391...33813649
NR annotation: XP_027047783.1, poly(A) RNA polymerase GLD2-A-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q503I9Poly(A) RNA polymerase GLD2 OS=Danio rerio OX=7955 GN=tent2 PE=2 SV=1
Q9VD44Poly(A) RNA polymerase gld-2 homolog A OS=Drosophila melanogaster OX=7227 GN=Gld2 PE=1 SV=3
Q9VYS4Poly(A) RNA polymerase gld-2 homolog B OS=Drosophila melanogaster OX=7227 GN=wisp PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001333 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03828
all species →		PAP_assocCid1 family poly A polymeraseFamilyInterproscan
PF19088
all species →		TUTaseTUTase nucleotidyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519
all species →		Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR002058
all species →		DomainPAP/25A-associatedInterproscan
IPR045100
all species →		DomainTUTase nucleotidyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12271
all species →		POLY A POLYMERASE CID PAP -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004652
all species →		Molecular Functionobsolete polynucleotide adenylyltransferase activityInterproscan
GO:0006378
all species →		Biological Processobsolete mRNA polyadenylationInterproscan
GO:0016779
all species →		Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123
all species →		Biological ProcessRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14079PAPD4, GLD2; poly(A) RNA polymerase GLD2EC:2.7.7.19
Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP