Detailed information of evm.model.Ap6.339 in Astrangia poculata

Genomic Location: Ap6:3032159...3046924
NR annotation: XP_020617016.1, trichohyalin-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002766 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15295
all species →		CCDC50_NCoiled-coil domain-containing protein 50 N-terminusCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029311
all species →		DomainCoiled-coil domain-containing protein 50, N-terminalInterproscan
IPR039303
all species →		FamilyCoiled-coil domain-containing protein 50Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22115
all species →		C3ORF6 PROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap6.339. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K25949CCDC50; coiled-coil domain-containing protein 50-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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