Gene detail

Detailed information of evm.model.Ap6.422 in Astrangia poculata

Genomic Location: Ap6:3810509...3814429
NR annotation: XP_027035643.1, LOW QUALITY PROTEIN: prostamide/prostaglandin F synthase-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6AZG8	Prostamide/prostaglandin F synthase OS=Xenopus laevis OX=8355 GN=prxl2b PE=2 SV=1
Q28IJ3	Prostamide/prostaglandin F synthase OS=Xenopus tropicalis OX=8364 GN=prxl2b PE=2 SV=1
C1C416	Prostamide/prostaglandin F synthase OS=Aquarana catesbeiana OX=8400 GN=prxl2b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007313 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13911 all species →	AhpC-TSA_2	AhpC/TSA antioxidant enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032801 all species →	Family	Peroxiredoxin-like 2A/B/C	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28630 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001516 all species →	Biological Process	prostaglandin biosynthetic process	Interproscan
GO:0047017 all species →	Molecular Function	prostaglandin F synthase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15717	PRXL2B, FAM213B; prostamide/prostaglandin F2alpha synthase	EC:1.11.1.20	Arachidonic acid metabolism	ko00590	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.