Detailed information of evm.model.Ap6.453 in Astrangia poculata

Genomic Location: Ap6:4082628...4087289
NR annotation: XP_020630439.1, uncharacterized protein LOC110067453 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8XJR3DNA polymerase III PolC-type OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=polC PE=3 SV=1
Q895K2DNA polymerase III PolC-type OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=polC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009139 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00929
all species →		RNase_TExonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR013520
all species →		DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR012337
all species →		Homologous_superfamilyRibonuclease H-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30231
all species →		DNA POLYMERASE III SUBUNIT EPSILONInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0008408
all species →		Molecular Function3'-5' exonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.453.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP