Detailed information of evm.model.Ap6.457 in Astrangia poculata

Genomic Location: Ap6:4105821...4112372
NR annotation: CAH3155876.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3MHN0Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1
P28072Proteasome subunit beta type-6 OS=Homo sapiens OX=9606 GN=PSMB6 PE=1 SV=4
Q60692Proteasome subunit beta type-6 OS=Mus musculus OX=10090 GN=Psmb6 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007448 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227
all species →		ProteasomeProteasome subunitDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023333
all species →		FamilyProteasome B-type subunitInterproscan
IPR001353
all species →		FamilyProteasome, subunit alpha/betaInterproscan
IPR000243
all species →		FamilyPeptidase T1A, proteasome beta-subunitInterproscan
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32194
all species →		METALLOPROTEASE TLDDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005839
all species →		Cellular Componentproteasome core complexInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0004298
all species →		Molecular Functionthreonine-type endopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02738PSMB6; 20S proteasome subunit beta 1EC:3.4.25.1
Proteasomeko03051deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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