Detailed information of evm.model.Ap6.495 in Astrangia poculata

Genomic Location: Ap6:4541547...4541801
NR annotation: KAJ7393202.1, E3 ubiquitin-protein ligase mib2 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIJ9E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1
Q96AX9E3 ubiquitin-protein ligase MIB2 OS=Homo sapiens OX=9606 GN=MIB2 PE=1 SV=4
Q68LP1E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus OX=10116 GN=Mib2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000489 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06701
all species →		MIB_HERC2Mib_herc2DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010606
all species →		DomainMib-herc2Interproscan
IPR037252
all species →		Homologous_superfamilyMib/herc2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202
all species →		E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.495.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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