Detailed information of evm.model.Ap6.525 in Astrangia poculata

Genomic Location: Ap6:4972618...4984069
NR annotation: CAH3036797.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96PM5RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RCHY1 PE=1 SV=1
Q9CR50RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rchy1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000291 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan
PF05495
all species →
zf-CHYCHY zinc fingerDomainInterproscan
PF01335
all species →
DEDDeath effector domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037274
all species →
Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan
IPR008913
all species →
DomainZinc finger, CHY-typeInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR037275
all species →
Homologous_superfamilyZinc finger, CTCHY-type superfamilyInterproscan
IPR001875
all species →
DomainDeath effector domainInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR017921
all species →
DomainZinc finger, CTCHY-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21319
all species →
RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0042981
all species →
Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap6.525.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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