Detailed information of evm.model.Ap6.580 in Astrangia poculata

Genomic Location: Ap6:5490257...5511009
NR annotation: CAH3107580.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5TZA2Rootletin OS=Homo sapiens OX=9606 GN=CROCC PE=1 SV=2
Q8CJ40Rootletin OS=Mus musculus OX=10090 GN=Crocc PE=1 SV=2
F6XLV1Ciliary rootlet coiled-coil protein 2 OS=Mus musculus OX=10090 GN=Crocc2 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002685 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15035
all species →		RootletinCiliary rootlet component, centrosome cohesionFamilyInterproscan

 InterPro
No InterPro signature was detected for evm.model.Ap6.580. This gene does have a gene model — the search simply returned no hit.
 PANTHER
PANTHER termDescriptionSource
PTHR23159
all species →		CENTROSOMAL PROTEIN 2Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap6.580. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K16469CROCC; rootletin-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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