Genomic Location: Ap6:8536975...8542595
NR annotation: KAJ7394760.1, hypothetical protein OS493_000593 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap6.888 |
| Transcript |
| evm.model.Ap6.888 |
| Protein |
| evm.model.Ap6.888 |
| UniProt accession | Description |
|---|---|
| B1H3C9 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus tropicalis OX=8364 GN=ddost PE=2 SV=1 |
| Q6GNR9 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Xenopus laevis OX=8355 GN=ddost PE=2 SV=1 |
| Q05052 | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Canis lupus familiaris OX=9615 GN=DDOST PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007733 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03345 all species → | DDOST_48kD | Oligosaccharyltransferase 48 kDa subunit beta | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR005013 all species → | Family | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48kDa subunit | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10830 all species → | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005789 all species → | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0008250 all species → | Cellular Component | oligosaccharyltransferase complex | Interproscan |
| GO:0018279 all species → | Biological Process | protein N-linked glycosylation via asparagine | Interproscan |
evm.model.Ap6.888.Transcript abundance of evm.model.Ap6.888 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
