Detailed information of evm.model.Ap7.1159 in Astrangia poculata

Genomic Location: Ap7:12785088...12792759
NR annotation: XP_020630245.1, translin-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q08DM8Translin OS=Bos taurus OX=9913 GN=TSN PE=2 SV=1
Q62348Translin OS=Mus musculus OX=10090 GN=Tsn PE=1 SV=1
P97891Translin OS=Cricetulus griseus OX=10029 GN=TSN PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003811 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01997
all species →
TranslinTranslin familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016069
all species →
Homologous_superfamilyTranslin, C-terminalInterproscan
IPR016068
all species →
Homologous_superfamilyTranslin, N-terminalInterproscan
IPR002848
all species →
FamilyTranslin familyInterproscan
IPR036081
all species →
Homologous_superfamilyTranslin superfamilyInterproscan
IPR033956
all species →
FamilyTranslinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10741
all species →
TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN XInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0043565
all species →
Molecular Functionsequence-specific DNA bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0003697
all species →
Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0016070
all species →
Biological ProcessRNA metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.1159.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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