Detailed information of evm.model.Ap7.116 in Astrangia poculata

Genomic Location: Ap7:1215922...1220254
NR annotation: XP_020615867.1, LOW QUALITY PROTEIN: deoxyribonuclease-1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P00639Deoxyribonuclease-1 OS=Bos taurus OX=9913 GN=DNASE1 PE=1 SV=3
P24855Deoxyribonuclease-1 OS=Homo sapiens OX=9606 GN=DNASE1 PE=1 SV=1
Q4AEE3Deoxyribonuclease-1 OS=Equus caballus OX=9796 GN=DNASE1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001730 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372
all species →		Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135
all species →		DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR016202
all species →		FamilyDeoxyribonuclease IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11371
all species →		DEOXYRIBONUCLEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004536
all species →		Molecular FunctionDNA nuclease activityInterproscan
GO:0006308
all species →		Biological ProcessDNA catabolic processInterproscan
GO:0000737
all species →		Biological Processobsolete DNA catabolic process, endonucleolyticInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0004530
all species →		Molecular Functiondeoxyribonuclease I activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.116.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP