Gene detail

Detailed information of evm.model.Ap7.1423 in Astrangia poculata

Genomic Location: Ap7:15284710...15291737
NR annotation: KAJ7386709.1, hypothetical protein OS493_006721 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap7.1423

atgtggttctatccggcgggaaaatttttgtttttcttcgtcgttcattttgttgtcatcgaatgtcaacttccaaaccttcagcctggagacgtagcaccatcatttgctctgcaaactttagatggcaggattgtttacaagaaaagtaatacgagttctaaaacgccaacacaccctgtgatatttcaccagtttacgaggcgttcggcatttttagaggcgttgtggacaaacgagacttctcttcaagagttcatcgagcactctccagggaacactcactatgtgttcatgtcatcttctgattccaggtctatggaggacgtgttatggttgaggaaacgtcttcataaagccattgagaagtatttcaaggggaaagcaaacctgctgcaacaggatttagaaacaacttgcctgcaatattacacaagcagtaggcataacaataacttagttcacaatgggactttggaaaaagaacccttctacaaactgtcagaactcaggaagtaccatacacctagaaataataaatgcagcaaaaattgggttgaatcatggaaggataggcttcattttgtcagtctgccagtgtatgattttggaaactggattccttatgcatcaatgcactggccttgttttggttcaggttgtgcgcttgctcaagtagtcatcaagtcaaaagaaggtgaagttgttctagtagcacagagattggatgcaagatatgactggttgccatcaccgcataatctgattcataagcatactcgctttcatgttgcttactatggaaatgcttgccgctttaaatcagagtgggataaaagaagtcggaataatgatgatgccaagacacataaaacaaccgagaaaaaagccagtgaaggacgcattgcactagtgtctcctggtggagactgttccttgtttactaagatctatcacatgaacaaggcaggaatcaatgcagttcttatatattctgaagaagatgagccaatcaaagaactgacgtgtggcaatcatcactgcttcacacctcttcacatatcagcgtccatgatttcacacaaagatggcctgcacatcaaacacttgttgcttgctaaaatgaagctctatgtttcttatcagtttactcctcaagaaaattattttctggctattgatggccagggaaaactagctgaagtaggcttgtttctcttcccatccttaaagtttatggcctatgaggcaaaatggtttaactacaaaacagatctaattcacaacttgactggcagtgcaaggataattcacgtgtttaaccacactttgatgaaaggagaggctggcgcagttcaaactgtccgtcttccaccccttgaagagttgcagttgtacaggaatgttgaactggacatgtccttgcactgccctggtaaaagcgattactcttgtcctcactgggatcatcttgtccacttgactgtctgctgtgacaaaaaaagtccactctgtggggaggagttgggccgctggataacaccatataggaggtctgttggacgttggttgacaaacattacacctctgttacctctctttacatctcagtcttgtactttacgaatgaaacatccttcatgggagagagcgtggaaaccttcccttgatattagactttcagatcacgtcaaattttcaacacatacatacagcggaaggcgggaagatcagtacaatgttccttacaagattatcaagttattcaggggtggtaaatttgacaagaactacaacaagaaacatcgccgcacgcacatattcagaattccgccagagacatcacaagttaaacttgtagccacgatcagcggccacggcagtgacaataatggctgtgcagagttttgtgtcacatcgcaccacttcattgttaatggacattcaaatgtgaaattgtttaaaaatgctgctactgctatgggctgtgcgaatagagtcggtgctggcgctgttccaaatgagcacggcacatggctgtacggcagagacggctggtgctgtggaatggacgtggtgccatgggtagtggatatcacaaaacaagttcgtgttggagagtactatattaacaaagtcaggtactttggttggtttaatggctccgatccccaccccactcgggatcctggtaatatagttatgaggtcgtatttggtgtattacaagtcagtagaggatcagttttctgatgaagtgtga

Transcript

evm.model.Ap7.1423

ATGTGGTTCTATCCGGCGGGAAAATTTTTGTTTTTCTTCGTCGTTCATTTTGTTGTCATCGAATGTCAACTTCCAAACCTTCAGCCTGGAGACGTAGCACCATCATTTGCTCTGCAAACTTTAGATGGCAGGATTGTTTACAAGAAAAGTAATACGAGTTCTAAAACGCCAACACACCCTGTGATATTTCACCAGTTTACGAGGCGTTCGGCATTTTTAGAGGCGTTGTGGACAAACGAGACTTCTCTTCAAGAGTTCATCGAGCACTCTCCAGGGAACACTCACTATGTGTTCATGTCATCTTCTGATTCCAGGTCTATGGAGGACGTGTTATGGTTGAGGAAACGTCTTCATAAAGCCATTGAGAAGTATTTCAAGGGGAAAGCAAACCTGCTGCAACAGGATTTAGAAACAACTTGCCTGCAATATTACACAAGCAGTAGGCATAACAATAACTTAGTTCACAATGGGACTTTGGAAAAAGAACCCTTCTACAAACTGTCAGAACTCAGGAAGTACCATACACCTAGAAATAATAAATGCAGCAAAAATTGGGTTGAATCATGGAAGGATAGGCTTCATTTTGTCAGTCTGCCAGTGTATGATTTTGGAAACTGGATTCCTTATGCATCAATGCACTGGCCTTGTTTTGGTTCAGGTTGTGCGCTTGCTCAAGTAGTCATCAAGTCAAAAGAAGGTGAAGTTGTTCTAGTAGCACAGAGATTGGATGCAAGATATGACTGGTTGCCATCACCGCATAATCTGATTCATAAGCATACTCGCTTTCATGTTGCTTACTATGGAAATGCTTGCCGCTTTAAATCAGAGTGGGATAAAAGAAGTCGGAATAATGATGATGCCAAGACACATAAAACAACCGAGAAAAAAGCCAGTGAAGGACGCATTGCACTAGTGTCTCCTGGTGGAGACTGTTCCTTGTTTACTAAGATCTATCACATGAACAAGGCAGGAATCAATGCAGTTCTTATATATTCTGAAGAAGATGAGCCAATCAAAGAACTGACGTGTGGCAATCATCACTGCTTCACACCTCTTCACATATCAGCGTCCATGATTTCACACAAAGATGGCCTGCACATCAAACACTTGTTGCTTGCTAAAATGAAGCTCTATGTTTCTTATCAGTTTACTCCTCAAGAAAATTATTTTCTGGCTATTGATGGCCAGGGAAAACTAGCTGAAGTAGGCTTGTTTCTCTTCCCATCCTTAAAGTTTATGGCCTATGAGGCAAAATGGTTTAACTACAAAACAGATCTAATTCACAACTTGACTGGCAGTGCAAGGATAATTCACGTGTTTAACCACACTTTGATGAAAGGAGAGGCTGGCGCAGTTCAAACTGTCCGTCTTCCACCCCTTGAAGAGTTGCAGTTGTACAGGAATGTTGAACTGGACATGTCCTTGCACTGCCCTGGTAAAAGCGATTACTCTTGTCCTCACTGGGATCATCTTGTCCACTTGACTGTCTGCTGTGACAAAAAAAGTCCACTCTGTGGGGAGGAGTTGGGCCGCTGGATAACACCATATAGGAGGTCTGTTGGACGTTGGTTGACAAACATTACACCTCTGTTACCTCTCTTTACATCTCAGTCTTGTACTTTACGAATGAAACATCCTTCATGGGAGAGAGCGTGGAAACCTTCCCTTGATATTAGACTTTCAGATCACGTCAAATTTTCAACACATACATACAGCGGAAGGCGGGAAGATCAGTACAATGTTCCTTACAAGATTATCAAGTTATTCAGGGGTGGTAAATTTGACAAGAACTACAACAAGAAACATCGCCGCACGCACATATTCAGAATTCCGCCAGAGACATCACAAGTTAAACTTGTAGCCACGATCAGCGGCCACGGCAGTGACAATAATGGCTGTGCAGAGTTTTGTGTCACATCGCACCACTTCATTGTTAATGGACATTCAAATGTGAAATTGTTTAAAAATGCTGCTACTGCTATGGGCTGTGCGAATAGAGTCGGTGCTGGCGCTGTTCCAAATGAGCACGGCACATGGCTGTACGGCAGAGACGGCTGGTGCTGTGGAATGGACGTGGTGCCATGGGTAGTGGATATCACAAAACAAGTTCGTGTTGGAGAGTACTATATTAACAAAGTCAGGTACTTTGGTTGGTTTAATGGCTCCGATCCCCACCCCACTCGGGATCCTGGTAATATAGTTATGAGGTCGTATTTGGTGTATTACAAGTCAGTAGAGGATCAGTTTTCTGATGAAGTGTGA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002154 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09112 all species →	N-glycanase_N	Peptide-N-glycosidase F, N terminal	Domain	Interproscan
PF02225 all species →	PA	PA domain	Family	Interproscan
PF09113 all species →	N-glycanase_C	Peptide-N-glycosidase F, C terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014784 all species →	Homologous_superfamily	Copper type II, ascorbate-dependent monooxygenase-like, C-terminal	Interproscan
IPR015196 all species →	Domain	Peptide-N-glycosidase F, N-terminal	Interproscan
IPR003137 all species →	Domain	PA domain	Interproscan
IPR008977 all species →	Homologous_superfamily	PHM/PNGase F domain superfamily	Interproscan
IPR053251 all species →	Family	Glycoprotein-specific N-glycanase	Interproscan
IPR015197 all species →	Domain	Peptide-N-glycosidase F, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR39319 all species →	SI:DKEY-256H2.1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016715 all species →	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap7.1423.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.