Detailed information of evm.model.Ap7.1442 in Astrangia poculata

Genomic Location: Ap7:15452460...15455286
NR annotation: KAJ7391526.1, hypothetical protein OS493_018577 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5REV9Sodium-dependent phosphate transport protein 2B OS=Pongo abelii OX=9601 GN=SLC34A2 PE=2 SV=1
O95436Sodium-dependent phosphate transport protein 2B OS=Homo sapiens OX=9606 GN=SLC34A2 PE=1 SV=3
Q27960Sodium-dependent phosphate transport protein 2B OS=Bos taurus OX=9913 GN=SLC34A2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001416 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02690
all species →
Na_Pi_cotransNa+/Pi-cotransporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003841
all species →
FamilySodium-dependent phosphate transport proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10010
all species →
SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005436
all species →
Molecular Functionsodium:phosphate symporter activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0044341
all species →
Biological Processsodium-dependent phosphate transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14683SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap7.1442 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples
0TPM > 0
4Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
whole organism · cold control 14 0 0.00 0.00
whole organism · heat control 12 0 0.00 0.00
whole organism · cold challenge 12 0 0.00 0.00
whole organism · heat challenge 11 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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