Detailed information of evm.model.Ap7.1478 in Astrangia poculata

Genomic Location: Ap7:15787603...15791105
NR annotation: KAJ7381256.1, hypothetical protein OS493_001373 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Z1C8Rap guanine nucleotide exchange factor 3 OS=Rattus norvegicus OX=10116 GN=Rapgef3 PE=2 SV=2
Q8VCC8Rap guanine nucleotide exchange factor 3 OS=Mus musculus OX=10090 GN=Rapgef3 PE=1 SV=2
Q8WZA2Rap guanine nucleotide exchange factor 4 OS=Homo sapiens OX=9606 GN=RAPGEF4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002400 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00027
all species →		cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018490
all species →		Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR000595
all species →		DomainCyclic nucleotide-binding domainInterproscan
IPR018488
all species →		Conserved_siteCyclic nucleotide-binding, conserved siteInterproscan
IPR014710
all species →		Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR043533
all species →		FamilyCyclic nucleotide-binding domain-containing protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23011
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007283
all species →		Biological ProcessspermatogenesisInterproscan
GO:0030552
all species →		Molecular FunctioncAMP bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.1478.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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