Genomic Location: Ap7:18282543...18297397
NR annotation: CAH3154860.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap7.1716 |
| Transcript |
| evm.model.Ap7.1716 |
| Protein |
| evm.model.Ap7.1716 |
| UniProt accession | Description |
|---|---|
| Q58EB4 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio OX=7955 GN=hibch PE=2 SV=1 |
| A2VDC2 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis OX=8355 GN=hibch PE=2 SV=1 |
| Q6NVY1 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens OX=9606 GN=HIBCH PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003622 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16113 all species → | ECH_2 | Enoyl-CoA hydratase/isomerase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032259 all species → | Family | Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type | Interproscan |
| IPR045004 all species → | Domain | Enoyl-CoA hydratase/isomerase domain | Interproscan |
| IPR029045 all species → | Homologous_superfamily | ClpP/crotonase-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43176 all species → | 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003860 all species → | Molecular Function | 3-hydroxyisobutyryl-CoA hydrolase activity | Interproscan |
| GO:0005739 all species → | Cellular Component | mitochondrion | Interproscan |
| GO:0006574 all species → | Biological Process | valine catabolic process | Interproscan |
evm.model.Ap7.1716.Transcript abundance of evm.model.Ap7.1716 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
