Detailed information of evm.model.Ap7.1918 in Astrangia poculata

Genomic Location: Ap7:20308939...20312775
NR annotation: XP_020611816.1, cyclic GMP-binding protein C-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8SSS9Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2
Q54WS5Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum OX=44689 GN=roco6 PE=3 SV=1
Q5S006Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000151 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08477
all species →		RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF16095
all species →		CORC-terminal of Roc, COR, domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032171
all species →		DomainC-terminal of Roc (COR) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47679
all species →		PROTEIN TORNADO 1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap7.1918. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.1918.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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