Detailed information of evm.model.Ap7.2073 in Astrangia poculata

Genomic Location: Ap7:21844131...21851207
NR annotation: KAJ7375484.1, 26S proteasome non-ATPase regulatory subunit 11 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F6P3G426S proteasome non-ATPase regulatory subunit 11A OS=Danio rerio OX=7955 GN=psmd11a PE=2 SV=1
Q8BG3226S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus OX=10090 GN=Psmd11 PE=1 SV=3
Q2KI4226S proteasome non-ATPase regulatory subunit 11 OS=Bos taurus OX=9913 GN=PSMD11 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005612 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01399
all species →		PCIPCI domainDomainInterproscan
PF18503
all species →		RPN6_C_helix26S proteasome subunit RPN6 C-terminal helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717
all species →		DomainProteasome component (PCI) domainInterproscan
IPR050871
all species →		Family26S Proteasome and COP9 Signalosome ComponentsInterproscan
IPR040780
all species →		Domain6S proteasome subunit Rpn6, C-terminal helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10678
all species →		26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005198
all species →		Molecular Functionstructural molecule activityInterproscan
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008541
all species →		Cellular Componentproteasome regulatory particle, lid subcomplexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap7.2073.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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