Gene detail

Detailed information of evm.model.Ap7.213 in Astrangia poculata

Genomic Location: Ap7:2745810...2746772
NR annotation: XP_020609340.1, protein HEXIM-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5M9G1	Protein HEXIM1 OS=Rattus norvegicus OX=10116 GN=Hexim1 PE=1 SV=1
A5D8S8	Protein HEXIM1 OS=Danio rerio OX=7955 GN=hexim1 PE=2 SV=1
Q4V7W3	Protein HEXIM1 OS=Xenopus laevis OX=8355 GN=hexim1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008946 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15313 all species →	HEXIM	Hexamethylene bis-acetamide-inducible protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024872 all species →	Family	HEXIM	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13469 all species →	HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0004861 all species →	Molecular Function	cyclin-dependent protein serine/threonine kinase inhibitor activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017069 all species →	Molecular Function	snRNA binding	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0045736 all species →	Biological Process	negative regulation of cyclin-dependent protein serine/threonine kinase activity	Interproscan
GO:0097322 all species →	Molecular Function	7SK snRNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15189	HEXIM1_2; protein HEXIM1/2	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.