Detailed information of evm.model.Ap7.2374.2.5f15e932 in Astrangia poculata

Genomic Location: Ap7:25081502...25087735
NR annotation: XP_020601955.1, tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A6H791tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Bos taurus OX=9913 GN=TRMT61A PE=2 SV=1
Q96FX7tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Homo sapiens OX=9606 GN=TRMT61A PE=1 SV=1
Q6AY46tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Rattus norvegicus OX=10116 GN=Trmt61a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005118 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08704
all species →		GCD14tRNA methyltransferase complex GCD14 subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014816
all species →		FamilytRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14Interproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR049470
all species →		DomaintRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12133
all species →		TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0030488
all species →		Biological ProcesstRNA methylationInterproscan
GO:0031515
all species →		Cellular ComponenttRNA (m1A) methyltransferase complexInterproscan
GO:0160107
all species →		Molecular FunctiontRNA (adenine(58)-N1)-methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07442TRM61, GCD14; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunitEC:2.1.1.219
EC:2.1.1.220
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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