Detailed information of evm.model.Ap7.2451 in Astrangia poculata

Genomic Location: Ap7:25936791...25944613
NR annotation: CAH3174622.1, unnamed protein product [Porites lobata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5T2R2All trans-polyprenyl-diphosphate synthase PDSS1 OS=Homo sapiens OX=9606 GN=PDSS1 PE=1 SV=1
Q33DR2All trans-polyprenyl-diphosphate synthase PDSS1 OS=Mus musculus OX=10090 GN=Pdss1 PE=1 SV=1
O43091Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dps1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003928 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00348
all species →		polyprenyl_syntPolyprenyl synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008949
all species →		Homologous_superfamilyIsoprenoid synthase domain superfamilyInterproscan
IPR000092
all species →		FamilyPolyprenyl synthetaseInterproscan
IPR033749
all species →		Conserved_sitePolyprenyl synthetase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12001
all species →		GERANYLGERANYL PYROPHOSPHATE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008299
all species →		Biological Processisoprenoid biosynthetic processInterproscan
GO:0004659
all species →		Molecular Functionprenyltransferase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006744
all species →		Biological Processubiquinone biosynthetic processInterproscan
GO:1990234
all species →		Cellular Componenttransferase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12504PDSS1; decaprenyl-diphosphate synthase subunit 1EC:2.5.1.91
Prenyltransferasesko01006deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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